Etheostoma spectabile (orangethroat darter): 116691040
Help
Entry
116691040 CDS
T08457
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03320
PPAR signaling pathway
esp04148
Efferocytosis
esp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116691040
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116691040
03320 PPAR signaling pathway
116691040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116691040
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116691040
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116691040
Nuclear receptors [BR:
esp03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116691040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
116691040
NCBI-ProteinID:
XP_032374247
LinkDB
All DBs
Position
6:6913358..6921756
Genome browser
AA seq
444 aa
AA seq
DB search
MSSQQTNSSASNSPTSILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPAHSPGMMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVSNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIGLKDGVLLASEL
QRDSAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKAELGCLRAIVLFNP
DAKGLSNTGEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcagaccaacagttcagcctccaacagccccaccagcatcttgggttct
cctttctcagttatcagtccctcacttaactccccagtggtctcaccctctctgggattt
ggacccatcagcaacagtcagatctcttcttcagcacctatatcagggatgcactcaatc
agcagctcagaagatatcaagcctccatttggcctgaggcccatgccagctcacagccct
ggaatgatgttgtctcagaaacgcatgtgtgtcatctgtggagaccgctcttctggcaag
cactatggagtgtacagctgtgaaggttgcaaaggtttcttcaaacgaactgtgcgcaaa
gaccttagctatacctgcagggataacaaagagtgcctggtcgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagagaaaccgtgagcgtgaaggagagcttgagttcagtgttggcgtgaatgag
gagatgcctgtggagaagattttagaggcagagacggctgtggaacagaagactgaactt
cactctgatggcggttctgctggcaactctccccatgatgcagttagcaatatctgtcag
actgcagacaaacagctgtttgccttggtggagtgggcaaagagaatccctcacttctct
gaactgcccctcgatgaccaggtcatcctcctgcgtgcaggctggaatgagctcctcatt
gcttcgttctcccatcgctccattggtttgaaggatggagttctcctagcctctgagctg
cagcgcgacagtgcacacagcgcaggagttggagccatttttgacagggagagtgtgcag
agcgcagaggttggtgccatatttgacagggtccttacggaacttgtcaataaaatgaga
gatatgcaaatggacaaagcagagctggggtgcctccgagccatcgtcctcttcaaccca
gatgctaaaggtctttccaacaccggtgaggtggagctccttagagaaaaggtctatgca
tcattggaagcctactgcaaacagaaatacccagagcagcagggaaggtttgctaagctc
cttcttcgactgccagcactgcgatctattggcttgaagtgcttggagcatcttttcttc
ttcaagcttattggcgacacacctattgacactttcctcatggaaatgcttgaagctccc
catcagttgtcttag
DBGET
integrated database retrieval system
