Etheostoma spectabile (orangethroat darter): 116691107
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Entry
116691107 CDS
T08457
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116691107 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
esp03051
]
116691107 (psmc4)
Proteasome [BR:
esp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
116691107 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_5
AAA_16
RuvB_N
nSTAND3
AAA_22
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
NACHT
ATPase_2
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_33
Parvo_NS1
AAA_18
AAA_17
AAA_25
AAA_lid_PRS2_C
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
116691107
NCBI-ProteinID:
XP_032374348
LinkDB
All DBs
Position
6:complement(15774391..15781254)
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AA seq
417 aa
AA seq
DB search
MEDIVAVEKNPDDMPAIVTSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLFKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgtagctgtagagaagaacccggacgacatgccagcaatagtgacctcc
agacctcagacgggcctgtcctttctggcaccagaaccagaagatcttgaggatctttac
agcagatacaagaagctgcagcaggagctggagttcctggaggtgcaggaggagtatatc
aaagatgaacagaagaacctgaagaaagaattcctccatgcccaggaggaggttaagagg
atacagagcatcccactcgtcattggccagttcctggaagctgttgaccagaacacagcc
attgtgggctccactacagggtccaactactatgtgcgcatcctgagcaccattgacaga
gagctgctgaagcccaacgcctcagtggctttgcacaagcacagcaacgccctggtggat
gtactccctcctgaagctgacagcagcatcatgatgctgacgtcagaccaaaagccagat
gtgatgtatgctgacatcggtgggatggacattcagaagcaggaagtccgagaagctgta
gagctgccgctcacacactttgagctttacaaacagattggcattgacccacccaggggt
gtccttatgtacggacctccaggttgtggtaagaccatgttggccaaggctgtggctcac
cacactacagcggcgttcatccgtgtggtgggctctgagtttgttcagaagtatctgggg
gaaggccctcgtatggtgcgtgatgtcttccggctggcgaaggaaaatgccccggccatc
atctttattgatgagatcgatgctatcgccactaagcgttttgatgcacagactggagct
gatagggaggtgcagagaatcttactcgagctgctaaatcaaatggacggctttgaccag
aacgtcaatgtcaaggtgatcatggccaccaacagagcagacacactggacccagccctg
ttacgtcctggtcgcctggacagaaagattgagttccccttgcccgaccgcaggcagaaa
cgtcttgttttctccaccatcaccagtaaaatgaatctctctgaggaggtcgacctggag
gactatgtggccagacctgacaagatctctggagccgatatcaactccatctgtcaagag
gctggcatgttggcagtgcgtgagaacaggtacatcgtcctgttcaaagatttcgaaaaa
gcttacaagaccgtcatcaaaaaagacgagcaggagcacgagttctacaagtag
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