KEGG   Etheostoma spectabile (orangethroat darter): 116691186
Entry
116691186         CDS       T08457                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116691186 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esp03400]
    116691186 (xrcc1)
DNA repair and recombination proteins [BR:esp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     116691186 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT SLC12
Other DBs
NCBI-GeneID: 116691186
NCBI-ProteinID: XP_032374467
LinkDB
Position
6:15488839..15511323
AA seq 624 aa
MPEIQLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVKDQDYEVLLVTSSFMSPTESRNGTNLNRVRFFGPNQLQKSAA
QEKWDRVKIVCSQPYSKNIAYGVAFVKFHSPPDKNDPPPETSPKLTKLGQFRVKEEPLSP
ASSLQPGSLFFSRENATKSSTSLKASPQSERLSYAAAALQAGGSSQSLGQASSSSSASPQ
PPAKRKFELSKMRQSSPGPPPSKKISPVGSPEGRAVTPKHKPSPASTPSPSTAKAAPAQT
SADRKRESQPKPKPKQPKASVQQVPFKRMMDGVVFVLSGFQNPFRGELREKALDMGAKYR
PDWTPDSTHLICAFANTPKYSQVKSAGGIIVRREWILDCHKRKQMISYKRYLMDGAESSS
ESEMEEDDQSEEEINTKTPQKQERQVTPKKTPEKRTEDDEYAGSTDVDEPTGDSDDESAV
DTEDELQRVENESRQKKAAVGGKMMKQEDPYGGSTDENTDAEAEEDHPIPELPDYLKGKH
FFLYGKFPNNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHDSFEDALMENGNLNFV
KPAWIYAINERQKILPYQPYSVVP
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgccagaaatccaactcaaacacgtcgtgtcttgcagcaccgaggacactactcacaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcaagacccggggag
aaacagacatcagtcattctgcagtttgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaagggtcagctttcattgaggtgctggtggggaattcttcagctgtcaaagac
caggactatgaggttcttttggttacgtcttccttcatgtccccaacggagagccgtaac
ggcaccaacttgaaccgggtgcgtttctttgggcccaaccaactgcagaagagcgcagca
caggagaagtgggacagagtgaaaattgtgtgtagccagccatacagcaagaacatagca
tacggagtggcctttgttaagtttcattcaccgcctgacaaaaatgatcctcctccagaa
acatccccgaaactgacaaagctgggacagttcagggtgaaggaggagcctctttcacct
gcttccagccttcagcctggcagtcttttcttcagtcgggaaaatgcaacaaagtccagt
acttcactcaaagcgtctcctcagagtgagaggttgagttacgcagcagctgccctgcag
gctggtggaagctcccagtcattaggccaggcttcctcctccagctctgcctcaccacag
ccaccagcaaaaagaaaatttgagttgagcaaaatgcgacagtcttcccccggccctccg
ccctcaaagaaaataagtccagtgggctcacctgagggcagagctgtgacccccaaacac
aagccgagcccagccagcacgccaagccccagcactgcaaaagctgccccggcacagact
tctgctgacaggaagcgggagagccaacccaaacccaaacccaaacaaccaaaagctagt
gtgcagcaggtcccattcaaacggatgatggatggggtagtgtttgtcctcagtggcttc
caaaaccccttcagaggggagctgagggaaaaggctctggacatgggagccaaataccgg
cccgactggacacccgactccacacacctcatctgtgccttcgctaacacccccaagtac
agccaggtgaaatcagcagggggcatcatcgtacggagagaatggatattggattgccat
aagaggaaacagatgatttcctataaacggtatttgatggatggagccgagtcaagctcg
gagagcgaaatggaagaggacgaccagagtgaagaagaaatcaacacaaagactccacag
aagcaggagagacaagtgacccccaaaaagacgccagagaagaggactgaagatgatgag
tatgccggctccactgatgtggatgaaccaacaggagacagtgatgatgagtctgcggtg
gacacggaggatgaactgcagagggtggagaatgagagcagacagaagaaagcagcagta
ggaggaaaaatgatgaaacaggaggatccatatgggggttcaacagacgaaaacacagac
gccgaggctgaggaggatcaccccatccctgagctaccagactacctgaaaggaaagcat
ttcttcctctacggtaaattccctaacaacgagaggcgccttctgttgagatacattgtt
gcctttaatggactgattgaggactacatgacagagaaggtgcagtttgtggtgaccagt
gaagggtggcacgactcctttgaagatgcgctgatggagaacggcaatctgaactttgtc
aaacctgcatggatttatgcaatcaatgaacgacaaaagatactgccctaccaaccctac
tcggttgtcccctga

DBGET integrated database retrieval system