Etheostoma spectabile (orangethroat darter): 116691192
Help
Entry
116691192 CDS
T08457
Symbol
cic
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116691192 (cic)
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116691192 (cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
116691192
NCBI-ProteinID:
XP_032374477
LinkDB
All DBs
Position
6:12105538..12140590
Genome browser
AA seq
2726 aa
AA seq
DB search
MRPLKKHRGRSSPLTRGRGGRRRGGSQPLQEKDPKRVKRETLFKTTQNTPNPPTHKQTLP
TVTNSNKEPITNSNTPTMEESTELRKPVESVEKEGKKAEEKTEKDKIVGTNGNSAVATES
VAFPTSAPAPLSTATPPLATNHSPNLGSVSSRKTATFKARVPKKKYTYEHFANNANALTT
IPTSRPAHMHNSYCNINSKISDSVNAPTNNFKCSNSISNSINVSINCSPNSNTTKAINTM
TNSGAGSHNTLINCSNSRSNNCSGNQSSVLTVDSRDTEANCFVSTEDKALRTADSQEKDS
QAGENESEGAPYSVRSSSTDTASEHSADLDVMEATGQSLHQKNSGYPATLPNLHHKEASL
SEGLAEVLAKGMKNQRVLARQIKRTMESGVRATGDRGVKEINSCPLLSVFRPGVVRRVSG
GTVEVQLQGEETLIKYPFHGGTVMTLSSGAESPVEFILDAPPPGMAPVAVRTRVCVPFGG
EEGGPLLYREGIITQVDPHPGVSFPYQVLLNEDRETLDNGGVGEEKEKRKANARTVWVSR
QSLRLLTPPWEVPHLDGGRAKEREREREREERERMEEMEVEREVCQLSIGMGVLGGGTRL
GHSFSHEKVVGGHPYVNAHPPPHSSTVTSSAGGNTVHGCGDNSSDRERQKQPNTPEEDVE
VSCFNMTLTVDPKPNAGTSQQINIVSRSSCYTPSSPHLALVRGLGPPHFSTLPSPQPPRS
PALLVSEMNNTTPHLPPSKTTPTQTPTPTSGGGSTSTSSRSRTPLSLAQQKYKKGDVVCT
PNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMETAGGGGGGGGGSSSGT
VTPDLRGRASSEFEWDDTSRESSETGSRGDSRPRLVLPSLLPHDLSSRFDFDECEAATML
VSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPSG
TGGSKVTTPAGGGERERHTSGIQPSFHSNLMFTVPMSPSKRKPDAPPPPPLPSHHHDYTP
KTEVEQGDLNNSFRVLSPQTSVSHSRTHTPTFSRPRGVTTPSSRSSPSSTAVSPPPLLVS
PTPPCPLTPDGGPRRVVPVSQQASRDSPVIVRNPEVPLAKFTECPLGIGGGGNEGGTDTS
SKDIGLTPLTPHPISGLQVPVPINAAAATVPNGTVVLRSPAQTLVLVSPTPSSLPTTDTP
ATPLQALSVTVSTTVTAPTPSSTDSSVEQEENRGTGFGGEVQQPVPCHPSPTALLPLILP
AESLHPVPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEGPHPVN
HPQAASLKTECQGVAAQSQEPAEAPPIVERGPPSRPPPSSDEPPPEKEKGDTEMERPDSE
TESDVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKSSPGKREKDHIRRPMNAFMI
FSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKW
CNKDRKKSSSEGRGVLGGKDIRERSMSESTEPHSVELKGVGPGLVGVSERSTGKGHVGQL
TRPRAFSQSAMHSLERSDRGNTQALAELAQMCGESGSQFSSHAPPLSQSQRGVSEDMTSD
EERMVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENGSGDESDRKRVFAPVICSSA
LSSSSHHTPHGRSVSLSSYPSSKRCDEGRSGGGAFSDHRRKDRGEGKDTFGGEGGGGVQA
TSISLTSGHSVISTSPAGGHPSSSVGSLGGNPLQGIGAVRVASTVVTNVMRPVISTPLPI
ASKPRDGGTLSSPHPPERKSLTPHQQPQFLIGSGSGSGVQATGGGYYSSSSPNPLGAGVG
PGGVVTNLVLGGTLSAQPTVQLITPSHQPQPCQQQAFSSSTVSVPHSQTNGPVPLSLLHP
QFLPASSLASPGGKAITQVQYILPTLPANPKSPPQQLGQPTSIFNLPTAPPTHMPLANGK
HQATSSLTGYTPSSAVGVVSPGTRVQTQSPVLQGKMLVPMATVRTAPAPAQQFPIVAPPL
PVQNGAQTGSKIIQIAPMPVVQSQLPQGGAVHPASPFPVTVGTAAVVAPGSAPSQAVLLP
PAPTRITYVHSTPGVPSTLPLVSTTTGASPTQQALPVTGSAYVPSPLATLGFTAIAPPGQ
TLVQPLIAGQPPLLATAQSPQPSISAPASASGGQIVTAVYPPSPSVTMATGVVSMTAVPP
SVVYSVSTPSSASPHILSKYTATPTTVTHPHLHSHLDRQADRHLPPDRPADRQTDRQAER
QTELLTHSDRHLERQASTNSSSVAPPSGSAVSIRPCSPPLQSQTPGNTPGTPKLTQLPVR
TPQKVKATVANIPVGSYEGGGRGKEREREKEREREREREATATSHFSFEPELAGQTGSPS
THPTEEPPPSERTLEGSSVPDSSDTRHRESTSAKETGWRDSLPSSPPPPPSATEPSLPPP
QTDKDGPAPKKVKARPPPLKKTFDSVDKSGRVLSEVYFEERFAELPEFRPEEVLPSPTLQ
SLATSPRAILGSYRRKRKNSTDLDSATDEQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDI
FTFDRAATDGEDILTDLEFDKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQTR
YSDIFPTKVCLQLKIREVRQKIMQTAAPSDVSGLGIPDSIGNLPGPSSSQSGEGYMRGGG
DLQDEDIEQGTEGSPEDPRDSKDSSR
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgttaaagaaacacagagggcgttcttccccattaactagaggtagagggggg
cgaaggagagggggctcacagcccctccaggagaaagaccccaaaagagtcaagagggag
acacttttcaaaaccacacagaatacacccaaccctcccacacacaaacagaccctgccc
acagtcaccaactctaacaaagaaccaatcacaaacagcaatacccccacgatggaggaa
tctactgagctgaggaaacctgtggagtcagttgagaaggaaggtaagaaggcagaagaa
aagacagaaaaggacaagatagtgggcacaaatggaaatagtgctgtggccactgaatct
gtagcatttcctacctctgctccagcgccactctccacagccacgccccctctggccacc
aatcacagccccaatttaggctcagtctccagtaggaaaacagccacctttaaggctcgt
gtacccaagaaaaaatacacatatgagcactttgctaacaacgcaaatgccctgactacc
attcctacctccagacctgcacacatgcacaacagttactgcaatatcaacagcaaaata
agtgatagtgtgaatgcgcccaccaataatttcaagtgtagtaacagtattagtaatagc
attaatgttagcatcaattgcagtcctaacagtaacactacaaaagctattaacaccatg
actaacagtggtgctgggagccataatactttaatcaattgcagtaatagtagaagtaat
aattgctcaggtaatcagtcatcagtcttaactgtggatagtagagatacagaagcaaac
tgttttgtttccacggaggataaagccctcaggacagcagattcccaggaaaaagattcc
caagctggggaaaacgagtcagaaggggccccttactcagtgcgctcttcatccactgat
acagctagtgagcactcagctgacctagacgtgatggaagcaaccggacaaagccttcat
caaaagaactccggctacccagctactctccctaacttgcaccataaagaagccagtctt
tcagagggactagccgaagttttggctaaaggcatgaaaaaccagagagttctagctcgc
cagataaagaggactatggagagtggggttagggctacaggggacagaggggttaaggag
attaactcatgccctttattatctgtgttcagaccaggggtggtgcgtagggtgagtgga
ggtactgttgaagtccagctccaaggagaggagactcttattaaataccctttccatggt
ggaaccgtgatgacattgtcttcaggagctgagagccctgtggagtttattttggatgcc
cccccacctggtatggcaccggtagcagtcaggactcgagtgtgcgtgccctttggtgga
gaggaggggggtcctctgctgtacagagaggggattatcactcaggtggacccccacccc
ggtgtgtcatttccttaccaggtgcttctaaatgaagacagagagactctggacaatgga
ggggtgggggaagagaaagaaaaaaggaaagctaatgctcggactgtgtgggtgtcccga
caaagtctgaggcttctcacccctccttgggaagtcccacatttggatggtgggagggca
aaggaaagagagcgggagagggaaagagaagagagggagcggatggaggagatggaggta
gagagggaagtgtgccagttgagtattgggatgggggtgctgggagggggaacaaggtta
ggccatagtttttcacatgaaaaggttgtaggtggacatccctatgtaaatgcacatcca
ccaccccattcctccactgtgacatctagtgcaggcggcaacacagttcatggctgcggc
gataactcctctgacagagagagacagaaacagccaaacactccagaagaggacgttgag
gtatcttgttttaacatgaccctcactgtggatcccaagccaaatgctgggacctctcaa
caaataaacattgtctccaggtccagttgctacaccccctcctccccccacctcgctttg
gtgcggggcctgggacccccccatttctccaccctacctagtcctcagccaccccgttcc
cctgctttactggtgtctgaaatgaacaacaccactccacacctacctccatcaaagacc
actcccactcagacccctactcccacttctggtggggggtccacctctacctcctctcgc
tctaggactcccctctcattggctcagcagaaatacaagaagggcgatgtggtgtgcacc
cctaatggtatccgtaagaagttcaatggtaagcagtggcgtaggctgtgctccagggag
ggctgtatgaaggagtctcagcgtcgaggatactgttcaagacacttgtccatgaggacc
aaagagatggagacagcggggggaggaggaggaggaggaggaggcagcagctcagggaca
gtcacccctgacctgcgggggagagcaagcagtgagtttgagtgggacgacacatcaaga
gagagcagtgagacaggtagcagaggagactccagaccccgcttggtcctcccctccctc
ctcccccatgacttgtcgtcacgctttgacttcgatgagtgtgaggccgccactatgctt
gtgtcattagggagctcccgctctggcaccccctccttttctcccatctctaaccagtcg
cccttctcccctgccccctctccctcaccctccccactctttggctttaggccggcaaac
ttctccccaattaccgcatccccagtcctccaacaccggaggcacaggcagcccagcggg
acagggggcagtaaggtaaccaccccagctggaggaggagaaagggagagacacacttcg
ggtatccagccctccttccacagcaacctgatgtttacagtccccatgagccccagcaaa
cgaaagcctgacgcgcctcctccaccacccctcccctcacaccaccatgattacacaccc
aagacagaggtggagcagggggaccttaacaactctttcagggtgctttccccacaaaca
tcagtttcacattcccgcacacacacaccaactttctcccgacccagaggagtgaccacc
ccctcttccagaagttcaccttcctccactgctgtctcccctcctcctctgttggtgtct
ccaactcctccttgtcctctaactcccgatggagggcctcgtcgtgtggtccctgtatcc
caacaggcctcgcgggactcccctgtcattgtgagaaatcccgaagtcccactggcaaaa
tttacagagtgtcccttaggaataggaggaggtggaaatgagggagggacagatacgtca
tctaaggacatcggcctaacacccctcacccctcacccaatttctggccttcaggttccc
gtccccattaacgctgctgcagccacagtaccaaatggcactgttgtcttgcggagccca
gcccaaactctggtgcttgtgtctccgacaccctcctccctgcccaccactgacacccct
gccacccccctgcaggccctgtcagttaccgtcagcacaacagtcacagctcccacacca
agtagcactgacagctctgtggaacaagaggagaacagagggacagggtttgggggtgag
gtccagcagccagttccctgtcacccttctcccactgctctgctgcccctgatcctccca
gctgaaagtcttcaccctgtcccacgaaaggacatcatcatgggacgccctggcacagtg
tggaccaatgtagagccccggtcagttccagtcttcccctggcattcattggtccctttc
ctggcacccacccaatcagatgcttcttctcagccaggagagggtccgcacccagtcaac
catccccaagcagccagtctgaagacagagtgtcagggggttgcagcgcagtcacaggag
cccgcagaagcacctcccattgtagagagaggtcctccgtcccggcctcccccctcttct
gatgagccgcctccagagaaggagaaaggagatacggagatggagaggcctgacagcgag
accgagagtgacgtggatgaccctttcctcccaggagttgtgccagagcagcccctctct
acatcaccagtaaagagacgcactcagtccctcagtgcactgcccaaagatggagataag
agcagccctggaaagagggagaaggaccacatccggcgaccaatgaatgcattcatgatt
tttagtaagcgccatcgtgcattggtgcaccagcggcacccaaaccaggacaacaggaca
gtcagcaagattcttggagagtggtggtatgctctgggacctaaggagaaacaaaagtac
catgatttggccttccaggtaaaagaggcccactttaaggcccacccagattggaaatgg
tgcaacaaagacaggaagaagtccagctctgagggccgtggggtcctagggggcaaagac
atcagagagaggagcatgtctgagtccacagaaccgcattctgtggagctgaagggggtt
ggtccaggactggtgggtgtgtctgaaaggagcacaggaaaaggtcatgtgggccagctt
acccgtccccgagccttctctcaaagtgccatgcacagcctggagcggagtgatagaggc
aatacacaggcactggcagaactggcccagatgtgtggggaaagtggcagtcagttttca
agccatgccccacccctgtcacagtctcagaggggggtcagcgaggacatgaccagtgac
gaggagcgcatggtcatctgtgaggaggagggagatgacgatgtcattgaggacccttat
cctagcagttccatagatctcaaatgtaaggagcgagtgactgacagcgatagtgagaac
ggttctggagacgaaagtgatcggaagagagtttttgctccagtcatttgctcctctgca
ttatcatcttcttcacaccatacccctcatggtaggagtgtctcactgtcctcttacccc
agcagcaagcgttgtgatgaggggaggtcaggagggggagcattttcagatcacaggagg
aaggatagaggagagggtaaggacacatttgggggagaggggggaggaggagtgcaagcc
acatctatctccctcacttctggccattcagtcatctccacttctccagctggagggcat
ccttcctcatcagtaggttcacttggggggaacccacttcagggcattggcgctgtaagg
gttgcatctacggtggtgaccaatgtaatgcgtcctgttatcagcacaccgctccccatc
gccagcaaacccagagatggaggaacgttatctagcccgcatccgccagagaggaagtcc
ttgactccccatcagcagccacaatttctgattggctcaggatcaggaagtggggtccaa
gccacaggtggtgggtactactcttcatcatcacctaatcctttaggtgcaggcgtagga
cctggtggtgtagtgactaatttggtgttaggaggaactctgtctgctcaacctactgta
cagctcatcaccccttcccaccaacctcagccctgccagcagcaagcgttttcctcctct
actgtttcagtaccgcatagccaaaccaacgggcccgtgcctctctccctgcttcatcct
cagttccttcctgcctcttccctagcatcccctgggggtaaggccatcacacaagttcag
tacatcctgcccaccctacctgccaaccccaagagtccacctcagcaactcggccagcca
accagtatcttcaacttgcccacagctccacccacacacatgcccctggccaatggaaag
catcaggcgacaagttcactgacaggatatacacccagctcagcagtgggagtggttagc
ccgggaactagagtgcaaacacagtctccagtgctccagggaaaaatgcttgttcccatg
gcaaccgtacggacagcaccagcccctgcccagcagtttcccattgtggctccacctctt
ccggtccagaacggtgctcagacaggaagcaagatcatccagatagcccccatgcctgtg
gtccagtcccagctgcctcaaggtggagccgtccaccctgccagccccttccctgtaaca
gttggcacagcggctgtggtggctccaggatcagccccctcccaggctgtactcctgcca
ccagctccaaccaggatcacctatgtccactccactccaggggtcccatccactctgcct
ctggtctccacgacaacaggtgcttcccccacccagcaagccctgccggtgactggatct
gcatatgttccatcgcccctggcaacacttgggttcacagccatcgcaccacctggacag
acgctagttcagccactgattgcgggtcagccaccgctcctagccacagctcagtctcca
cagccttccatctcagcccctgcctcagcctccgggggccagatagtcaccgccgtatac
cctccttcacctagcgtcaccatggcaacaggtgtggtctccatgacagcagtaccgccc
agcgtggtctactccgtctccaccccttccagtgcttccccccacatcctgtccaaatac
acagcaacccccactacagtcacgcacccacatctgcattcccatctggacagacaggca
gacaggcacctgcctccggacagacctgcagatcgacaaactgacagacaagctgagagg
cagacagaactgctgacacattcggacagacatctggagaggcaggcctccactaatagc
agctcagtggctcctcccagtggctcagctgtgtccataaggccctgcagtcctccactt
cagagccaaacgcctggcaatacaccaggtacacccaaactaacccagcttccagtcagg
acccctcagaaggtgaaggcaacagtggcaaacatccctgtaggcagctatgaaggagga
gggcgaggaaaagagagagaaagggaaaaggagagggagagagaaagggagagagaagct
acagccactagccacttctcctttgaaccggagttggcggggcagacagggtctccatca
acacatcctactgaggagccgccaccctctgaaaggaccctggagggctccagtgttcca
gactcctctgacacacgacatagagaaagcacaagcgccaaagagactggatggagagat
tccctcccctcctcacctcctccccctccatcagccacggaacccagcctgccaccccca
cagactgacaaagacggtcctgcacccaaaaaagtcaaagcccgcccaccgccacttaag
aagacttttgactcggtagacaagtctggcagggtgctgtcagaagtgtattttgaggag
cgctttgccgagctgccagagtttcggcctgaagaggttttgccttcacccaccctgcag
agtctggccacttcaccccgcgccattctgggcagctaccgtcgcaagaggaagaactct
acagatttggactcagccactgacgagcaagtctctcctaagagaaagagtcggcggcgc
tcaagttgcagctcagagcccaacacacctaaaagtgccgccaaatgcgagggggacatc
ttcaccttcgacagagcagccacagacggagaagacatcctgacagatctggagtttgat
aaggtgccgtactcctcgctgcggcgaacactggaccagaggcgagcgctggtcatgcag
ctgttccaggagcagggcttctttccatcagctcaggccactgcagccttccagacaaga
tactctgatatatttcccactaaggtgtgtctgcagctgaagatcagggaggtccggcag
aagatcatgcagacagctgccccctctgatgtctctggtttaggtatccctgactcaatt
ggcaacctccctggaccttctagctcccagtcaggagaaggatatatgagaggaggtggg
gacctgcaggatgaagacatagagcaagggacagaggggagcccagaggatcctcgtgat
tcaaaggactcttctagatga
DBGET
integrated database retrieval system
