KEGG   Etheostoma spectabile (orangethroat darter): 116691193
Entry
116691193         CDS       T08457                                 
Symbol
mdc1
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
esp  Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:esp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esp03400]
    116691193 (mdc1)
DNA repair and recombination proteins [BR:esp03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    116691193 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 116691193
NCBI-ProteinID: XP_032374480
LinkDB
Position
6:11728303..11737839
AA seq 2033 aa
MDATQMICDSILESDEEENEEENTIKTGRPLAKLCILKNEHIPETELPLFLGDNVLGRDP
NNCTLPLPAPSISKQHATICVSVYRRRGYHSKVDVEALVWDLGSMNGTHKGHLKLTPNVR
YALSERERLVVADIPCLYVSCAVDTVPSQGDMRTPVSSKSGVKAPLPDASGEKGGDTITG
SKKCVIGGTKTRVSSPDQEDTRETPVRTNCLSFEQTPTQSQGTLVPESGSDSDGERGDRR
RKALVSDSDSYKSSPTCSTFLSPPNKIVPESEDESPITPSSSTKNRPYRHVSFSKEETDL
DVGQQQPIKKKAPAVVDDSEEEEEREEERATLRERTSGDKKSSPHRNTESGQDVPVKQES
NVSLTGEDELPVSTPSIFTDLIPAFDMDSDTDMEGDEEGVVSAGPVTMNTNQQADQPPDT
SQLYMDSDTDVDEDDYVSDKVPKSLPSSADHSNPTHVISVIQPEGITMDSDTDVDDEDAA
VSDAGTKAKPTSIQSTHTTDSAPSPQLKDFHLDSDTDVDEEEEKKHETNTTCSTIDETPT
KLDIKPLGPDSNPPAPHSLHPDSDTDDEVIPALAISEPLMTSAVTESSTSADAGAELCIL
CDSDTDVEDDLVIPVAVPILSVGPGITTAALQSELKADVNPDDLRVDSDTDVEDEKVDIG
EAGEGQIPSFPRENTPGFLVPLKQNCSTPIQVSEREVEDMETQAFLSPSTGPFRRVVAPA
IRPIPLSTVSDSQEDDEFVVAETQSFVLQTRDCQANPPEDHTMDPTQAFDLDSSGDEHGE
QSNRGGSVQLGSSDSNHLQAQAQAQALAMESTQAFVQCVNLEDTQEYAAISSADRTSMQN
DSNLEATQAYGENEEPVQCLVMSAKEGQLDLALEATQAYLLEPSSEDESSEDERKNTATA
ETQAFDFPTSSTLAMAETQPMSALEEEEEEEEEESLNKENPISSVIEVKSTPQNGTDERE
EHGEAAKSQKSHLSEALSLAETQPMRRSDNEESEDEDFLLGPQIIKANPLQLGEEQTQRL
PNSELSAVDTQPMNTGEDGEIDEEDWIPGPRKRRAKQLQHEEETQPLGNSEVSVVETQPM
GRGDREQSDEEDSSPGPRKRTARPQQIQEEETQPLTNFESSTVETLQPPRGKGRQSEAGT
SGTTIRGTRGTRARLTEAEEQAECSEPPKRQTRGKNKALPTTRGRRGKARPDEEESEEEE
EVVQAKGAGGKKSMREQKSTEERLETERNKHAEKANLMKEQEERREAKLEMERKEKEEKE
RSQAKIAKRLRLEWERAEKDRIDRERKEQEEKKRAGKAQKEIEEQLGREREEKEEKERLE
HENAEREEKERLEMEKGQEQGEKESLQTAKREQEERLEREKKEQEHQARLEKEATEREEQ
ESLEKRKQEENKPKTPARSRRTARTTAALRATEPERDSTVSANDFDDVPARRTRSRSNSS
NSVSSERSAPSVNTQGSRGKGRGAKGTSRPPQAAIVRSTNRRSTVAAEATRVTSNDVSPR
GVRSRSNSTNSEISSCSVSSQGRGHGGRQRGRGRKTEAEPHSIPPFNSQSEPNLAPKPTA
RGRKAEESSNEVRHEDENEKSDSQQASTTRGRRRANENSSEPAAADKQGPSNQEERCASE
DSPLPKRNVRGRCQKAVKSETVEALVAPATSDGDEAKDKRKGRKRELQANKEEDSSSSSK
VFKGKEKAQTPEAAEEEANCETNDDIPVRAKRRGRASSAQAKKNAKDSPTEGQVKEESEK
MEEETIERRGKGRPSMVQKKKKEEQGESGTSVEQDVEASEPQAPTSSGSRKRQAPVDSSP
VAKTPRSSSASPAVSGRLRPSSQDYKVLFTGVVDEGGERVLARLGGSMAKGVADMNCLVT
DKVRRTVKFLCAVAKGVPIVTTHWLEKSGKAGSFLSPSAFIVKDLEQEKKFNFCLQESLR
IASSQSLLQGYDIHVTKSVKPEPVHMKDIISCSGATFLSKMPSSHKPQTVVISCEEDWLL
CGPALSASLPVVTAEFILTGILQQKLDLQTHTLSAPGNTVQPAGGRGRGRKKS
NT seq 6102 nt   +upstreamnt  +downstreamnt
atggatgctactcagatgatctgtgactcaatcttggagtcagatgaggaagaaaatgaa
gaggagaatacaattaagacgggacgaccattggctaaactgtgtatcttaaaaaatgag
cacatccctgagacagagttaccactcttcttgggagataatgtgctgggccgtgacccc
aacaactgcaccctgcctttgccagcaccctcgatatccaagcaacacgctaccatctgc
gtctctgtctacaggagaagaggttatcacagtaaagtagacgtagaggctttggtttgg
gacctagggagcatgaatgggacccacaagggccacttaaagctgactcctaatgtacgc
tatgccctcagtgaacgtgaacgtttggtggtggcagacatcccatgtctgtatgtcagc
tgcgctgtagacacagtcccttctcaaggggacatgaggactcctgtaagcagtaaatca
ggggttaaggccccgttgccagatgcctcaggagaaaagggaggtgacacaatcacaggc
agcaagaaatgtgtcattggaggtactaaaactagggtgtcatcacctgatcaggaggac
acaagggagactcctgtcagaaccaattgcttgtcctttgagcaaactccaacccagtca
caggggaccctggtcccggaatctggctcagactcagacggagaaagaggagacaggagg
cgcaaggctttggtgtctgattcggactcctataaatcaagtcccacatgttcaacattc
ctgagtcccccaaacaaaatcgtccctgaaagtgaggatgaaagtcccatcacaccgtcc
tcctccactaaaaataggccttacagacatgtcagcttcagcaaggaggagacagactta
gatgtggggcaacagcagccgataaaaaaaaaggcacctgcagttgtggatgacagtgaa
gaggaggaagaaagggaagaagaaagagcaacactcagagagagaacgtctggggacaaa
aaatcctcaccacacagaaacacagaaagtggacaggatgtgccagtgaaacaggaaagc
aatgttagtcttacaggagaagatgaactgcctgtatccacaccatcaatcttcacagat
ttgattcctgcatttgacatggacagtgacactgatatggagggagacgaggaaggagtg
gtctctgcgggacctgtgaccatgaatacaaaccaacaagctgatcagccaccagacaca
agccagctttacatggacagtgatacagatgttgatgaagatgattatgtctcagacaaa
gttcccaaatctctgccttcctctgctgaccacagcaatcctactcatgtaatttcagtt
attcaaccagagggcatcactatggacagtgacactgatgtggatgatgaagatgctgct
gtctcagacgctggtacaaaagcaaaacccacgtcaattcagagcacacacacaactgac
tctgctccttcaccgcagctgaaagacttccacctagacagtgacacagatgttgatgag
gaagaagaaaagaaacatgaaacaaatactacatgctctacaatagatgaaactcccact
aaattagatatcaagccacttgggcctgattccaaccctcctgcacctcatagcctgcat
ccagacagtgacacagatgatgaagttattcctgcccttgccatcagtgaacccttgatg
acgtctgccgtcacagaatcatccacctctgcagatgcaggagctgaattgtgtattttg
tgtgacagcgacacagatgtggaagacgatctggtcatacctgttgctgtcccaatcttg
tcagtgggtcctggtatcacaacagcggctcttcagtcagagttgaaagcagatgttaat
ccagacgacctcagagtggacagtgacacagatgtggaagatgagaaggtggatattgga
gaggccggagagggccagattcctagcttccccagagaaaatacacctgggtttctggtt
cctctaaagcagaactgctccactcctatacaggtgtcagaaagagaagtggaagacatg
gagactcaggctttcctgagcccctccacaggtccatttagacgtgtggtagctcctgct
attagacctataccattgtctactgtctcagacagccaggaggatgatgaatttgtcgtg
gctgagacacagtcctttgtccttcagaccagagactgccaggccaaccctccagaggac
cacacaatggaccccacccaagctttcgaccttgattcttctggtgatgaacatggcgaa
cagtccaacagaggagggtctgtccagctgggatcgtccgacagtaaccacctgcaggct
caggctcaggcccaagctctagcaatggagagcacccaagcttttgtgcagtgtgtgaat
ctggaagatacccaagaatatgctgccatctcaagtgcagacagaacctccatgcagaat
gattcaaatctggaggctacgcaggcctatggagagaatgaggaaccagtccaatgttta
gtcatgtctgctaaagaaggtcagttagatttagccctagaagcaacacaggcatatctt
ttagagccctccagtgaggatgaaagcagtgaagatgaaagaaaaaacactgctactgct
gagactcaggctttcgactttcctacttcatctactctcgccatggctgaaacccaacca
atgtctgccttggaggaggaggaggaggaggaggaggaggagagtttgaataaagaaaat
cctatttcctctgtaatagaagttaagtccacaccacagaatggaacagatgagagggaa
gaacatggggaggcagctaaatctcaaaagagccatctcagtgaagctctgtctctagct
gaaactcagccaatgcgtagaagtgacaatgaagaaagtgaggatgaggacttccttctg
ggtccacaaataataaaagcaaatccactgcagcttggagaggagcaaacacaaagactc
ccaaactctgagctctctgctgtagatactcagccaatgaatacaggtgaagatggagaa
attgatgaagaggactggattccaggtccacgaaaaagaagagcaaagcaattgcaacat
gaagaggaaacacagcccctcggtaattctgaagtctctgttgttgaaactcagcccatg
ggtagaggtgacagggagcaaagtgatgaagaagactcaagtccaggtcctagaaaaaga
acagcaaggccacagcaaattcaagaagaggagacccaaccactcactaattttgagtcc
tccactgttgaaaccttgcagcctccgaggggaaaggggagacaatctgaagctgggacc
agtggtaccactattagaggtacacgagggacaagggcaagattaacagaagcggaggag
caggcagagtgttctgaacctcccaagagacagacaagagggaagaataaagctttgcca
actaccagaggaaggagaggaaaagcaaggcctgatgaggaggagagtgaggaagaggag
gaggtagtgcaggctaaaggcgctggaggaaaaaaatccatgagggaacagaaatctacg
gaagaaaggcttgaaacggagagaaacaagcacgctgaaaaagccaacctaatgaaggaa
caagaagaaaggagggaagccaaattagaaatggaaagaaaagagaaggaagaaaaagag
aggtcgcaggctaaaattgcaaaaaggttaagacttgagtgggagagagcagaaaaagat
agaatagacagggaaagaaaggaacaagaagaaaagaaaagagctggtaaggcacaaaag
gaaatagaagaacaattgggcagggaaagagaagagaaggaagaaaaagagagattagag
cacgaaaatgccgaaagagaagaaaaagagagattggagatggaaaaaggacaggaacaa
ggagaaaaagaaagtttgcagacagcaaagagggaacaagaagagagacttgagagggag
aagaaggagcaagaacaccaggcgagactggagaaggaagcaacggaaagggaagaacaa
gaaagtttggagaaaagaaaacaagaagaaaacaaacccaaaacacctgcaagaagtcga
agaacagccagaacaactgctgccctgcgtgcaaccgagccggaacgagactcaaccgta
tcagccaatgattttgatgatgtcccagcgaggagaaccagatctcgctctaactcatcc
aactctgtcagctcagaaaggtctgctccaagtgtgaacacccaggggagcagggggaaa
ggcagaggagcaaaggggaccagtaggccaccccaggccgccattgtcagaagcaccaat
agaaggagcacggtggctgcagaggcaacacgagtaacaagtaatgatgtttcccctcgg
ggagtccgttctaggtccaactccaccaactcagagatttccagctgcagcgtgagctct
cagggcagaggacatggaggcaggcagcgtggaagagggaggaaaacagaagcagagcca
cattccatccctcctttcaatagccagagtgaaccaaatttggctcccaaacctacagcc
agaggcaggaaagcagaggaatcctctaacgaggttcgtcatgaggatgaaaatgagaag
tcagactctcagcaggctagtaccacaagagggcgacgccgagccaatgaaaacagctct
gaacctgctgctgcagataagcaaggcccttctaatcaggaggagagatgtgccagtgaa
gattcacctttgcctaaaaggaatgtcagaggcagatgccaaaaagcggtaaagagcgag
actgtggaggcactagtagctcctgcaaccagtgatggagatgaggctaaggacaaaaga
aaaggaagaaaaagagagttgcaggcaaataaagaagaggattccagcagtagctccaaa
gttttcaaagggaaggagaaagcccaaacaccagaggcagcagaggaagaagcaaattgt
gaaacaaacgatgacattccagtccgagctaaaagaagaggtagagcatccagcgctcaa
gcaaagaagaacgcaaaagattcccccaccgaagggcaggtgaaagaagagagtgagaaa
atggaggaggagactattgagcggagaggcaaaggtcggccatcaatggtccagaaaaag
aagaaagaggagcagggagaaagtggaacatctgttgaacaggacgtggaggcatcagag
ccccaggctccaaccagcagtggatcccggaagcgacaggctcctgtggactcctcacct
gtggcaaagacccctcgttcctcctctgcgtccccagcagttagtggtcgattacgacct
tccagccaggactacaaggtgctgttcaccggtgtggtggatgagggaggggagagagtg
ttagctcggttgggaggcagcatggctaaaggcgtggcagacatgaactgtctggtgact
gataaggtccgcaggactgtcaagtttctgtgtgccgtggctaaaggagttcccattgtc
accacacactggcttgaaaagagtggtaaggctgggagcttcctgtctcctagtgctttc
attgtgaaggacctggagcaggaaaagaagttcaatttctgcctgcaagagtctctgagg
attgccagcagtcagtctctcttacaggggtatgatatccatgttacaaagtccgtgaaa
ccagagccagttcatatgaaagacataatctcttgcagtggagctacctttctttctaag
atgccctcttctcacaagcctcagactgtagttatttcctgcgaggaagactggctgctg
tgtggcccagctctctctgcatctctcccagtcgtcacggctgagtttattctcacaggg
atccttcagcagaaacttgaccttcagacccacacactctctgcccctggaaatactgta
cagcctgcaggaggcagggggaggggccgaaagaagagttag

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