Etheostoma spectabile (orangethroat darter): 116691226
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Entry
116691226 CDS
T08457
Name
(RefSeq) transient receptor potential cation channel subfamily V member 6-like
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116691226
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116691226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ion_trans
Motif
Other DBs
NCBI-GeneID:
116691226
NCBI-ProteinID:
XP_032374551
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All DBs
Position
6:11060515..11068304
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AA seq
719 aa
AA seq
DB search
MSPSLATSAPSKLNHWWSQLRFRLQNKKGWKEMLDETFLLHTKYINEVPLFYEAKKNNVS
CIKKLLSCASTNIFERGALGETALHVAVMADNLEAAVALMDGAPELINEPMTSELFQGVT
PLHIAVVNQNINLVHHLISRGGDVATPRVTGLYFRKRIGGLLYYGEHILSFAACAGNEDI
ISMVIDAGASTRGQDYRGNTALHVLVLQPNKTIACQAIDLIMARDAELDQSVPLDMVPNY
RGLTPFKLAAKEGNIVAFQHLVNKRRVVQWSLGPLTSNLYDLTEIDSWADDMSVLELIVG
GHQRKARRILEVTPVRQLVSLKWNLYGKHYFRLLLLLYLLYIGTFTLCCAFRPLKDAPEN
YTQSEMDKTIRVQKTFHESYVTHEDNLRLVGEIISILGAFVILLLEIPDILRVGAKRYFG
QTALGGPFHVILISYACLVVLLCVFRVCEVQGEAVVMAVCLVLGWSNVMFFARGFEMLGP
YVIMIQKIIFGDLTKFMWLSFIVLIGFSTSLWMVYMTQDPGSIPAYRSFPITLFSQFELS
VGLIDLPVDHTITTHPIVHVLHCAFSVVSYILLLNLLIAMMSDTHWRVAQERDELWRTQV
VATTLMLERRLPRCLWPRLGVCGLKYGLREYWYLRVEDRNDPMLQKMRRYVKAFSKDEEK
EKEGLEKTDIIKGSISGTPKLRPKNNVRSLTGWQMIRHSALGLEMEQEEPEEDEEIKYV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtctctggccacgtctgctccgagcaagctcaaccattggtggagccagctg
aggtttcgtcttcaaaacaagaaaggatggaaggagatgttggatgagacgtttctgctc
cacacaaaatacataaatgaggttcctctcttctatgaggctaaaaagaacaatgtcagc
tgcatcaagaaactgctgagttgtgcatccactaatatcttcgagagaggggctcttggt
gagacagcgcttcatgttgctgtgatggctgataacctggaagctgccgtggctctgatg
gacggagctcctgaactcatcaacgagcctatgacgtccgagctcttccaaggtgttact
cctctccacattgctgtggtgaatcagaacatcaacctggttcatcatctgatcagtcgt
gggggtgacgtggctacacctcgagtcaccggtctgtacttcaggaagaggataggagga
ctcttatactatggtgagcacatcctgtcttttgctgcgtgtgctgggaacgaggacatt
atctccatggtgatcgacgcaggggccagcaccaggggccaggattaccgtggtaacaca
gcgcttcatgttttggttttgcagcccaacaagacgattgcgtgccaggccattgacctg
attatggcacgcgatgcagagctggaccagtcagtgccactcgacatggtacccaactac
cgaggccttacaccttttaaactggctgccaaagagggaaacatagtggcgtttcagcac
ctggtaaataaaaggcgtgtagtccagtggagtctgggtcccctgacctctaacctgtat
gacctgacagagatagattcatgggccgacgacatgtcagtgctggagctcatcgtgggc
ggtcaccagagaaaggcaagaaggatactggaggtgactcctgtgaggcagctggtcagt
ctgaagtggaacctctatggaaaacattatttcaggctgctgctgttactgtatcttctg
tacatcgggaccttcacactgtgttgtgcatttcgccctctgaaggacgctccggagaac
tacacacagtcagaaatggacaaaaccatccgggtccagaaaacatttcatgagagttat
gtgacacatgaggacaacctgcggctggtgggtgagatcatcagcatcctgggagctttt
gtcatcttgttgctggagattcctgatatactgagagtgggggcaaagcgctattttggc
cagacagcactgggaggccccttccatgttatccttatcagctatgcgtgcctggtggtg
ctgctgtgtgtgttcagagtctgcgaggtgcagggagaggctgtggtgatggcagtgtgt
ttagttctcggttggagcaatgtcatgttcttcgcccgaggttttgaaatgctcggccct
tatgtcatcatgatacaaaagattatatttggagacctgaccaagttcatgtggctgagt
ttcattgtgctcattggtttttccacctccctgtggatggtgtatatgacccaggatcct
ggttccattcctgcatatcgctcttttcccatcaccctcttctcccagtttgagctcagt
gtgggcctcatagatctgcctgtggaccacaccatcactacccacccgatcgtccacgtg
ctacactgcgccttctctgtcgtctcctacatccttctgctaaatctactgatagccatg
atgagtgacacacactggagggtggcccaggagagagatgagctctggaggactcaggtg
gtggccacaactctgatgctggagaggaggctgccccgctgcctgtggcctcgacttggg
gtgtgtgggctcaagtacggtctgagggagtactggtatctcagggttgaggacagaaac
gacccaatgttgcaaaagatgcggcgttacgtcaaggctttctctaaagacgaggaaaag
gaaaaggagggattggagaaaactgacattataaaggggtccatatccggaacccccaag
ctcagacctaaaaacaatgtgaggtctctgacagggtggcagatgattcgccacagcgct
ttgggtttggagatggagcaggaagagccagaggaggacgaggaaattaaatatgtttaa
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