Etheostoma spectabile (orangethroat darter): 116691304
Help
Entry
116691304 CDS
T08457
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116691304 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esp03009
]
116691304 (emg1)
Enzymes [BR:
esp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
116691304 (emg1)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
90S particles
Other 90S particles
116691304 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
116691304
NCBI-ProteinID:
XP_032374722
LinkDB
All DBs
Position
6:complement(11218879..11221594)
Genome browser
AA seq
238 aa
AA seq
DB search
MAAPNEKKRGLEHLDEYEPKPAKHLRSLHDRMAERRLVVILEGASLETVKVGKTFELLNC
DQHKNMIVKSGRNPGHIRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFTRFCGLMVQLLHKLSVRAADGPQKLLRMIKNPVSDHLPPGCPRISTSFSAAGEAVC
PRSLVPEGPAAVVVGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctaatgagaagaagcgtggtcttgaacatttggacgaatatgaaccaaaa
ccagccaaacatctccgcagcctgcacgaccgtatggcagagaggagactcgttgttatt
ctggagggagcatcgttagaaacagtgaaggtcggaaaaacctttgagctgttaaactgt
gaccaacacaaaaatatgatcgtcaaaagtggaaggaatccgggacatataagaccagac
atcacacatcagtgtctgctcatgttgatggacagtccactaaacagggcaggccttttg
caagtttacatccacacagagaaaaatgccttaatagagatcaacccacagacccgcatc
ccaagaaccttcactcgcttctgtggccttatggttcagctgcttcacaagctgagtgtc
agggccgctgatggtcctcagaaactcctgaggatgattaaaaacccagtgtctgaccac
ctgcctcccggctgtccccgcatatccacctcgttctctgctgccggagaggctgtctgt
cctcggtctttggtgccggagggaccagccgcagtggtggtcggagcatttgcacatgga
gcggtgaacgtggactacacagagaagacggtgtccatcagtaactatcccctctctgca
gcactgacctgtgccaagatgtgctctgctttcgaggaggtgtggggtgtcgtgtga
DBGET
integrated database retrieval system
