Etheostoma spectabile (orangethroat darter): 116691342
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Entry
116691342 CDS
T08457
Symbol
carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116691342 (carmil1)
Membrane trafficking [BR:
esp04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116691342 (carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
Motif
Other DBs
NCBI-GeneID:
116691342
NCBI-ProteinID:
XP_032374774
LinkDB
All DBs
Position
6:4639192..4709506
Genome browser
AA seq
1444 aa
AA seq
DB search
MNEEVSEVPKELLESVRDAVGRKVKLSLRRRVKLEIKGDKTENRVLALASHRAYLLTARI
PTKVEHSFNYLEIQGIACNKPTQLFIEYERGSFSLKLLSTEEVNDVVAHIGNCLLRICPG
LPPSKVMKKLCMEPPDRLTSLQTLWENNKPAEPGPCGGFSQMYRCVCDWLGLPYKEEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLSIKDYKLSADVCEQILR
VVSRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLANNPLEDRGISSLGAQF
AKLHMGLKHLNFSKTSLSPKGVNSLCQSLSANPSISSSLVHLDLSGNVFRGDDMQHFYHF
LGQRNNLANLDLSNTDCSLDQVCSALLRGSVEYLSVLNVSKSIFPHRKGKEVPPSFKHFF
SSAMSLSSINVSGTKLPPEALKALLLGLASNLNLKEVSLDLSCCELGHCLRSGGSQILEG
CIAEIPNISSLDISDNGLDSDLSTLLVWLAKNRSIRHLSLGKNFNNIKSKNLAPVLDSLV
HMIQEEESPLTSLSLADSRLKSDLTIVLNALGSNSSLTRLDISGRHGRHGAKMLAKALQI
NSKLRTVFWDKNNTGPQGLQDVAAALESKNFTIRFMPIPIIDASQALKASPEKTEDALLK
IENYLYRNHETRKYLQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLRNSETDAILED
VRSAENLIKDARNSKTLLPNLYHLGSAAREEVNSSSAGPIQEKLESMAGEVTTVMDQQLQ
TLLESMVDAAETLCPHVMKRSSLRPELMKASSAKMVVPKSFVTKTLLEQSGVDIINKISE
VKLSLASFLSDRIVDEILEALSTSQHTLADHLVRRGRPLVQQESVDLDVPEEKIPKRAST
ELLEAERLEDLETCMILCCTSVTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPVHV
EDPLSQTPPTPSHVMPKLEHRAPGGMVELPSEEEKKLQHFTKLRPRRNKKTHSSKIPQIN
STPSQDGEQNGLMGRVDEGVDEFFSTKVTKMDSKRYKSSESQDGEKKKSKGGFLNLIKRS
AKSDKADKSDKSDKSDKSDKSDKLDKSDKSDKLDKSEKSEKNQATPPASGPSSASVASMT
AFIPEDPSSPKVAVKSPAPEPKSRDASSRSQPTDHSSSSDRSEELRTPDSIDEPWESSDG
RGSPQGGRRYPGLQIMGSGLLAEMKAKQERRAHKSSSPDKPDSNAAAAKSQPTIPESRSS
SGSIHKSDPSSGSPEKSPPRGETKPDPAPRLRATSSSSSPGGPVSPKPPVPQGGKPALAA
RPTIPLKPRTSSNSRSIDESSDSPSSGSVSPKVTVLPPTLKRTVSEKDKEGQTGLQSGGS
ANKTTQDVRTGSVSDSVQRPSRLRTNSEDHSSSKTKGQSPNPDKAVRKKSSDSVEEADKD
FILI
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaagtgtcagaggtccccaaagagctcctggagagtgtgagggatgcagtg
gggaggaaggtgaagctgtcgctgagaaggcgagtcaaactggagatcaaaggagacaag
acggagaacagagtcctggcacttgcatctcaccgagcctacctcctgactgcacgcatt
cccaccaaggtggaacactcctttaattatctggagatccaggggattgcttgtaacaag
cctacacagctgttcatagagtacgagcgtggctctttttccctgaagctgctctctaca
gaggaggtcaatgacgtggtcgctcacataggaaactgtctgctgaggatatgtcccggt
ctaccacctagtaaagtgatgaagaagctctgcatggagcctccagacaggctaacctct
ctacagactctgtgggaaaacaacaagcctgctgagcctggaccctgtggtggattttca
cagatgtacagatgtgtttgtgattggttggggctgccttacaaagaagaggtgcagtgg
gatgtagacaccatctatttgacacaagacaccagagaactcaacttgcaggacttcagc
catctggagaacagggatttggtggctataatagcagtcctggagtttaaccagtggttt
acgaagctctccatcaaggactataaactgtctgcagatgtgtgtgagcagatccttcga
gttgtgtctcgctcaagtcgactggaagagttggttctggacaacgcaggactcaaaacg
gattttgcccagaagctggctgctgccctggcccacaaccccagctcaggactcaccacc
ataaatcttgccaacaacccactggaggacagaggtatctcctccctgggtgctcagttt
gccaaacttcatatggggctcaagcatttaaacttctccaaaacctcactatcacccaaa
ggggtgaacagcctttgtcagtcactgagtgccaacccgtccatctccagcagcctggtc
catctagacctctcagggaatgtcttccgaggagacgatatgcagcatttctaccacttc
ctgggtcaacgcaacaacctggcaaaccttgacctctccaacaccgattgctcattggac
caggtttgctcagctctgctgcgaggctcggttgaatacctctctgttcttaatgtgtcg
aagagcatcttccctcacaggaaaggcaaagaggtgcccccgtcgtttaagcacttcttc
agcagcgccatgtctctgagctccatcaacgtttcagggactaagctgccgccagaggcc
ctcaaagctctcctgcttggcttggccagtaatctcaacctgaaggaagtgtctctcgac
ctcagctgctgtgagcttggccattgtttgcgatcaggaggttctcagatccttgaaggt
tgcattgcagagatcccaaacatctccagcctagacatctctgacaacggcctggactcc
gatctgtccaccctgctggtgtggttggctaagaaccgatccatcagacacctgtctctg
ggcaagaacttcaacaacatcaagtccaaaaaccttgctccagtgttggacagcctggtc
cacatgattcaggaagaggagtcgcccctcacctctctgtctctagcagactccagactg
aagagtgatctgaccatcgttttgaacgctcttggcagcaactcctctctaaccaggtta
gacatcagcggacgccatgggagacatggagccaagatgttggccaaggcgctacagatc
aactccaaactcaggactgtgttttgggataaaaacaacaccggccctcagggtcttcag
gatgtagcagccgctttggaaagtaagaacttcaccattcgtttcatgcccattcccatc
atcgatgcctcccaggctctgaaggccagccctgagaagacagaggacgccttgctaaag
attgagaattatctgtacagaaaccatgaaaccagaaaatacctacaggaacaagcctat
cggctgcagcaaggcatcgtgaccacaaccacacaacagatgattgacaggatttgtgtg
aaggtgcaggaccacctgaactctctgaggaactcagagacagacgccatcttggaggac
gttaggtcagcagagaacctgatcaaagatgccaggaactcaaaaacgctgctccctaac
ctctaccacctaggatcagctgccagagaggaggtgaacagctcgtcagccggacctatc
caggagaaactggagtctatggctggggaggtgactactgtcatggaccaacaactacag
accctgttggagtcgatggtggatgcagcagagactctgtgtccccatgtgatgaagagg
agtagtcttcgtccagagctaatgaaggccagttcagctaagatggttgtacccaaaagc
tttgtcaccaaaaccctcctggagcagtctggggtggatattatcaacaagatcagtgag
gtgaagctgagtctagcgtcctttctgtccgatcgcattgttgatgagattttggaggct
ctttccacttcgcaacacactctggcagaccatctggtgaggcgaggtcgccccttggtg
cagcaggagtcggtggatctggacgtcccagaagagaagattcctaaacgggcatcgacc
gagctcctggaggctgagaggctggaggatctggagacatgcatgattttgtgctgcacc
agtgtgactcctaaatccaagaggaagagcatccacagcagaatgcttcggcccgtgtct
cgtgcctttgagatggagtttgacctggacaaggccctggaggacgtccctgtccatgtg
gaggatcctttatcccaaactccaccaactccatctcatgtcatgccaaaactggagcac
cgagcgccaggagggatggtggagctaccgtctgaggaggaaaaaaagctgcagcacttc
actaaactgcgaccccgcaggaacaagaaaacacattccagcaaaatacctcaaatcaac
agtactccatctcaggatggggagcagaatggcctcatgggaagggtggatgagggtgtg
gacgagtttttctctacaaaggtcaccaagatggattccaaacgttacaagagttcagaa
tctcaggatggagaaaagaagaagagtaaaggaggattccttaacctcatcaaacgttcc
gccaaatctgacaaagcagataagtctgataaatcggacaaatctgataaatctgataaa
tctgataaattggacaaatcagataaatctgataaattggacaaatctgagaaatctgag
aaaaaccaggcgacccctccagcttcaggtccatcctcagcctctgtagcctcgatgacg
gctttcatccctgaggacccctcttcaccaaaggtggcagtaaagagcccagcgcctgag
ccaaagtccagagacgcctccagccgctcgcagcccacagaccacagcagcagctcagac
cgctcagaggagctgaggacgccagactctatagacgagccctgggagagttcagacggc
cgaggcagtcctcagggaggcaggcggtacccagggttgcagataatgggcagcggcctt
ctggccgagatgaaggcaaagcaggagaggagagcacacaagtcttccagccctgacaag
cctgacagcaatgcagcagcagccaagtctcagcccaccattccagaaagtaggtcttct
agtggctcaattcataaatccgacccttcatctggttctccagagaagagccctcctcgt
ggcgagactaagcctgacccagcccctcgtctaagggctacatcctcctcaagttcgcct
gggggaccagtgagtcccaaacccccggtgccacaaggagggaagcctgctctggctgcc
cgacccaccatcccactgaagccaaggaccagcagtaacagcaggagcatagatgagagc
tcagattcccccagcagtggcagcgtgtcccctaaggtcacagttcttcctcccacgctg
aagaggacggtgtcagagaaagacaaagagggccagaccggtctgcagtcaggaggctct
gccaacaaaaccactcaggatgtgaggacggggtctgtgtcagactctgttcagcgaccc
agccgtctccgcaccaactctgaggaccatagctcctctaagaccaagggccaatctcca
aaccctgacaaggctgtgcgcaagaagtcctcagactctgtggaggaggcagacaaggac
tttattttaatataa
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