Etheostoma spectabile (orangethroat darter): 116691422
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Entry
116691422 CDS
T08457
Symbol
fga
Name
(RefSeq) fibrinogen alpha chain isoform X1
KO
K03903
fibrinogen alpha chain
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116691422 (fga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116691422 (fga)
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116691422 (fga)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116691422 (fga)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116691422 (fga)
Hyaluronan
Extracellular matrix or blood plasma proteins
116691422 (fga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
116691422
NCBI-ProteinID:
XP_032374917
LinkDB
All DBs
Position
6:30318424..30329589
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AA seq
683 aa
AA seq
DB search
MERLNVLVCLGLVCAASALAQVVDPRGARPVEQGTRSETCATERDWPFCSDDDWGAKCPS
GCRILGLINKFDHGAMKRIEKIRGLLDLNKAKHRSADQVSKQTYDYLKDKLTVDSDNDNS
YYNLAQTLRQRITDMKIKIDRQLRILGALKDRVKDQVVDMQRLEVDIDIKLRSCKGSCQS
YTVHQLDRESYVELEKQVGQLDALSAQSIESVGTLSVMKSRPLQGVIVDSVFKSKDVGGG
QQRENMFPEVRTVQLVLEQEGSSSSSPATISKVPGTSFTPSTSSSSSSSTTTSSKSITEL
GGRGGGGDDVFGTGLGTSHVGTRTVSCTRSTRRTVVHTKNGPVEKVEEVFEGGPECSAMT
DLTKGGMGALFPSLGHTSSSSSSSSSSSVTKTVHAGGAKGSLLDTKTDFGNPFGADAGLE
GLDMGLFDTGAAEDDLPDIHARSVKSVVTERRADYVGKDCVEAHQNHLNGESNGLFKIRP
GGAASASAPVLVVYCQQAGLMGGWLLAQQRESGALGFNRTWAEYRDGFGSVDAAGRGEFW
LGNRNLHLLTGQGESMLRVELEDWEGGVAGAEYAVRVGAEADGFPLHVSGYTGDAGDALA
PSHDGMRFSTFDRDSDLWGGSCAGRHGGGWWYNRCQTANLNGVYHKGAKNQPHEAENGVV
WATYKPANYSLKAARMFIRPAAF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactcaacgtactcgtgtgtctggggttggtttgtgcagcttcagctctggcc
caggtggtcgaccccagaggcgcccgaccggtggagcaaggcaccagatctgagacctgt
gccacggagagggactggcctttctgctcagacgacgactggggcgccaaatgcccgtcg
ggctgcaggatactgggactgataaataaattcgaccacggggcgatgaagaggatcgag
aagatccgaggcctcctggacctgaacaaggccaagcaccgctccgcagaccaggtctcc
aagcagacctacgactacctgaaggacaagctcaccgtcgactctgataacgacaacagc
tactacaacctggcccagacgctgcgtcagaggatcacagacatgaagatcaagatcgac
cgacagctgaggatcctgggggccctgaaggaccgggtcaaggaccaggtggtggacatg
cagaggctggaggtggacatcgatattaagctccgatcctgcaagggatcgtgccagagc
tacaccgtgcaccagctggaccgggagagctacgtggagctggagaaacaggtcggccag
ctggacgccctgtcggcccagagcatcgagtccgtggggaccctgtccgtgatgaagagc
cggcccctgcagggcgtcatcgtggacagcgtcttcaagtccaaggacgtcggcggtgga
cagcagagggagaacatgttccccgaggtgaggacggtccagttggtcctggagcaggag
ggctccagctcctcgtccccggcaaccatctccaaggtcccaggtacttccttcactccg
tccacctcctcctcctcctcctcctccaccaccacgtcctctaaatccatcaccgagctc
ggaggacgcggcggcggcggcgacgacgtcttcggcacggggctcggcacgagccacgtc
ggcaccagaaccgtgtcctgcacccgcagcacccgacgcaccgtggtccacaccaagaac
ggcccggtggagaaggtggaggaggtgttcgagggcggccccgagtgctcggccatgaca
gacctcaccaagggggggatgggcgccctcttccccagcctcggccacacctcctcctcc
tcgtcctcgtcctcctcgtcctccgtgaccaagacggtgcacgccggcggcgccaagggg
agcctcctggacaccaaaaccgatttcgggaacccgtttggtgcggacgccgggctcgaa
gggctcgacatgggcttgttcgacacgggcgccgcggaggacgaccttcctgacatccac
gcccggagtgtgaagagcgtcgttaccgagcgccgggccgattacgtaggcaaagattgt
gtcgaggcccaccagaaccacctgaacggggaatcgaacggcctgtttaagatcagaccc
ggcggcgccgcctccgcctcggcgccggtgttggtggtttactgccagcaggcggggcta
atgggcgggtggttgttagcgcagcagagggagagcggcgcgctcggcttcaaccgcacc
tgggccgagtaccgcgacgggttcggctcggtcgacgccgccggccgcggggagttctgg
ctgggcaaccgcaacctccacctgctgaccggtcagggggagagcatgctgagggtggag
ctggaggactgggaagggggcgtggccggcgcagagtacgcggtcagggtcggcgccgag
gcggacgggttcccgctgcacgtgtccgggtacaccggggacgccggcgacgctctggcg
ccgtcccacgacgggatgaggttcagcacctttgaccgggatagcgacctgtgggggggg
agctgcgccgggcgccacggcggcgggtggtggtacaaccgatgccagacggcgaacttg
aacggcgtttatcacaaaggcgcgaaaaaccagccgcacgaggctgaaaacggggtcgtc
tgggcgacgtataaaccggccaattacagcctgaaggcggcgaggatgttcatccgcccc
gctgcgttttaa
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