Etheostoma spectabile (orangethroat darter): 116691467
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Entry
116691467 CDS
T08457
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1.1-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116691467
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116691467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
116691467
NCBI-ProteinID:
XP_032374998
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Position
6:5456921..5467495
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AA seq
750 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSRNNTEGAMDLLRELKGFNMTLKLLQETRIGMSVNGIRKHCT
DEEVIALAKILIKDWKRLLDSEKPSEVKNDLDSSKTVVSPNRSPSETQSSHRRLDVNPKH
DSDPDKKHPDKHRKEKHNAEHLNKKTHTDDSSDEKHLEEPQNEKHPKEIRKEEHVEEPKK
QCNVEDAQVELNKKKPKHLQDLQSEKHRPEPRKERPFGEPKKMRHMEEVKKEKHPEEPKK
HSYTDDMKKDKQKEESSHERPIKSPQQERPPTEPQRGKPAFHKSIFERKGVMDSNVLYPT
RFPSPPRPARPPLVVKRPSVDVKKDRKDSKDSSSRHPLPHASRPTSPPARLEVKKERKLT
LDPNAPFAPLPLHLHPPPPRKEPPDPNAPLPPLPLHMHPPPAQPKRPSLDGKKESKKELS
DYKPLPQKKTSDQVKKDRKDSSDSKVPKKHSDEAKRERKDSSDSKPPLPKNPSLDVKKEK
HRKDSSDSKPSQPVKRQSGDFKPDRRESVDSKKSSPPPAKKLTIERRESHGSKTSQPGPP
QRKPSTDSIERKGKIDTPKTPTTPTSPMSPSFSSTGGPLSPHLATGDSVRDKCIEMLAAA
LRTNDDFKDFGTNCDSMAAEIEDHIYQETKATDMKYKNRVRSRISNLKDPKNPGLRRNVL
AGSIDLSRIASMSAEEMASDELRNLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCRKKNC
TYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggaggaagatctcattcggattgcaaaaaaactggacaagatggtgtctcga
aataacacggagggcgccatggacctgctgagggaactgaaaggtttcaatatgacactc
aaacttctccaggaaacaaggatcggcatgtctgtgaacggtatcaggaagcactgcaca
gacgaggaagtcattgccttggcaaagatcctcattaaagactggaaaagacttctggac
tctgagaaaccatctgaagtgaagaatgatttggattccagtaaaacagtcgtgtctcca
aaccgctccccctctgagacacaaagcagtcacaggagacttgatgtcaacccgaaacac
gactccgatcctgacaaaaaacaccccgataaacacaggaaagaaaaacataatgctgaa
cacttaaacaaaaagacacacacagatgattcaagtgatgaaaagcacctggaggagccc
caaaatgagaaacatcccaaagaaatcagaaaagaggagcatgtagaagaaccaaaaaaa
cagtgcaacgtggaggacgcccaagtggaattgaacaagaagaaacccaagcatttacaa
gacctgcagagtgagaaacacaggccagaaccgagaaaagagagaccgttcggagagcca
aagaagatgagacacatggaagaagtcaaaaaggaaaaacacccggaggagcccaagaag
cacagctacacagatgacatgaagaaggataaacaaaaagaagaaagcagtcatgagagg
ccgataaaatcaccgcaacaagagaggccgccgactgaaccccagagagggaaacctgct
tttcacaaatcaatatttgaaaggaaaggagtgatggacagcaatgttctgtatcccacc
cggttcccctctcctcctcgacctgctcggcctcctctcgtggtcaaacgcccctctgtg
gacgtgaaaaaagacagaaaggacagtaaagactcttcctcccgacatcctcttcctcat
gcttctcgaccgacctctccgccggctaggctggaagtaaagaaagagaggaaacttaca
ctggacccaaatgctccatttgctcctcttcctcttcaccttcatcctcctccacccaga
aaagagcctcctgaccccaacgcccctcttcctccacttcctcttcacatgcatccccca
cctgctcaaccgaagcgtccctccctggacgggaaaaaagagagcaaaaaggagttgtca
gactataaacctcttccgcagaagaagacgtcagatcaagtgaagaaagacaggaaagac
tcatcggatagcaaagtgcctaaaaaacactcggatgaagccaagagagagaggaaagat
tcatctgactctaaaccaccacttcccaaaaatcccagtttggatgtgaaaaaggaaaaa
cacaggaaagactcctccgactcaaagcctagccaacctgttaaacgtcaatcaggtgac
ttcaaacctgacaggcgggaatccgttgattcaaagaaaagcagcccacccccagcaaag
aagctaacaattgaaagaagagagtctcacggctctaagacttcccagcctggacctcca
cagaggaagccctctactgacagtattgaaaggaagggcaaaattgatacccctaaaact
cccaccactccgaccagccccatgtcacccagcttcagttctaccgggggtccgctgtcc
cctcacctcgctactggagactccgtcagggacaagtgcattgagatgctggcagctgcc
ctgcgcacaaacgacgacttcaaagattttggaactaactgtgacagcatggctgcagaa
atcgaagatcatatctaccaggagacaaaggccactgatatgaaatacaaaaacagagtc
cgcagtcgcatcagcaacctgaaggacccgaagaaccctgggctacgcagaaacgtcctc
gcaggaagcattgacttgagccgtatcgccagcatgtctgccgaggagatggccagtgac
gagttgagaaacctgaggaacgttctcacccaggaggccatcagggagcaccaaatggcc
aaaactggtggcaccaccaccgacctgctgcagtgcggcaagtgcaggaagaagaactgc
acatacaaccaggtgcaaacacgcagtgctgatgagccaatgaccacatttgtgctgtgt
aatgagtgtggtaaccgatggaagttctgctga
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