Etheostoma spectabile (orangethroat darter): 116691468
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Entry
116691468 CDS
T08457
Symbol
irx6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116691468 (irx6)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116691468 (irx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116691468
NCBI-ProteinID:
XP_032375003
LinkDB
All DBs
Position
1:complement(25757677..25763509)
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AA seq
510 aa
AA seq
DB search
MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGGTQTAAAAAAAASF
CCPSYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFPYSTDPSAIYSTLNPQYD
IKDSTGTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLY
EHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKATDDRKDDF
NKSEQDCVTKDSSDCKEEKDLHLSDLDDMDDDDCDKLDSDCEKVAADDHDLQRVMAVSGA
PQKRDCSSELHLSLTNNFHAFPCAIKSVTTLPPLPSDFLDPVLSKAPSLTGPAGTVSLSH
FEASDKPRIWSLARTAASGVILSPQQHGSEQRTGNTTGDCQLQSARLTGALTGHCGAMRG
LHESGSATNTESPFSEGSSLHSKVYGTGSYSHKDIQLHCSSYAALPDTCQYSTIEGFSGG
KAETQSTDLSEACGTVQDDKVTAFRPVMKR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagcaatgtctttctcgcaatttggatacccctacaatgcaact
tcccagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacaggcggcacccagaccgccgctgccgccgccgccgctgcctccttc
tgctgcccgtcctatgagaaccggctcctggcgagcagccggacggagctgaacgcagca
ctggggatgtatagctcaccatacgccgcagcggctgccgccagccagaactacgccaac
tacttcccctacagcaccgacccatccgctatctactccactctgaatccacagtatgac
attaaggacagcacaggcactttacactctggcatcactcaaaccgctgcatactatcca
tatgaccattcacttggacagtatcaatatgacagatacgggacagtggactttaatggc
acagcccgaagaaagaacgcaactcgtgaaaccaccagcactctgaaaacatggttgtat
gagcatcgcaagaacccctacccaaccaagggagagaagatcatgctggccatcatcacc
aaaatgaccctcactcaagtgtccacttggttcgccaacgccaggaggagattaaagaag
gagaacaaaatgacctggtcaccaaagaataaggccaccgatgacaggaaggatgacttt
aacaagagcgagcaagattgtgtcaccaaagattctagtgattgcaaggaggagaaggat
ctgcatctgagtgatctggatgacatggatgatgatgactgtgacaagctggacagtgac
tgtgaaaaggtggctgccgatgaccacgatctccagagggtcatggcagtatccggagcc
cctcaaaagagagattgcagctccgagctgcacctgagtttaactaacaacttccacgcg
ttcccctgcgccatcaaaagtgtcaccaccctccctcctctcccgtctgacttcctggat
cctgtgttgtccaaggcaccctccttgaccggccccgcaggaacagtgtccctgtctcac
tttgaagcatcagataagcctcggatttggtctctggcacgtacggcggcttccggggtc
atactgagccctcagcagcatggctcggagcagaggacaggcaacacaaccggggactgc
cagctccagagcgccaggcttacgggggctcttactggacattgtggggccatgagaggc
ctccatgaatctggcagtgccaccaatactgagagccccttctctgagggctcatccttg
cactcaaaagtctatgggactggcagctacagtcacaaggacatccaactgcactgttca
tcctatgctgcactcccggacacatgtcagtactccactattgaaggattctctggtggc
aaagcagagacacagtcaactgacctgagtgaagcctgcgggaccgtgcaggatgacaag
gtcactgcgtttagaccggtgatgaagaggtga
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