Etheostoma spectabile (orangethroat darter): 116691513
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Entry
116691513 CDS
T08457
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116691513 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116691513 (prpf31)
Spliceosome [BR:
esp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116691513 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
116691513
NCBI-ProteinID:
XP_032375098
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All DBs
Position
6:complement(10447161..10455948)
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AA seq
508 aa
AA seq
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MSLADELLADLEEAGDEGDDGLYPEEEEGDSDGEATQGRTDAGLEDIQEEMEVDYSKAES
VASIAKLRNSKQFSEIMEKISKYSGKQRRNSEVSGPVESDPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYVRTVKELGNNLEKCKTNETLQQILTNATIMVV
SVTASTTQGTLLSEDELKQLEESCDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLASRVDSFHESSAGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEAKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggacgagctactggcagatttggaggaggccggagatgagggggacgac
gggttgtatccagaggaagaggagggggatagtgatggagaagcaacacagggaaggaca
gatgcagggctggaggacatccaagaggagatggaggtagactacagtaaagctgagagc
gttgcgtccatcgctaagctccgcaatagcaaacagttttctgagattatggagaaaatt
tcaaagtatagtggaaagcagcgcaggaactcagaggtctcggggccagttgagtctgac
ccagaatacaggctgatcgttgcagccaacaacctcacagtggagatcgacaatgagctc
aatatcattcacaagtttactcgggacaagtactccaagaggttcccagagctcgagtct
ctggtgccagattctctagattatgtccgcacagtcaaggaattggggaacaatctcgag
aagtgtaaaaccaatgaaactctgcagcaaatcctcaccaatgccactattatggttgtc
agtgtcacagcctcgaccacacaggggacactgctaagtgaggatgaactgaagcaactg
gaggagtcatgtgacatggctctggagctgaaccagtctaaacacaggatatatgaatat
gtagagtcccgaatgtcattcattgccccaaatctatccatcattgttggcgcgtcaaca
gcagccaagatcatgggtattgctggcggcctcactaacctctccaagatgcccgcctgt
aatctcatgctgctgggagctcagagaagaaccctgtccggcttcagcagtacctccctg
ctgccccacaccggctacatctaccactgtgatgttgtgcagtcactaccgcctgacctc
aggaggaaggcagctcgtctcgtgtctgcaaagtgcactctggcttcccgagtggacagt
ttccatgagagttcagccggcaaggttggctacgatctgaaagaagaaattgaaaggaag
tttgataagtggcaggaacctccgccagtgaagcaggtaaaaccgctgccagccccactg
gatggacagaggaagaagagaggaggaagaaggtatcgaaagatgaaggagcgtctggga
ctgactgagatcaggaaacatgctaacaggatgaccttcgcagagatcgaagacgatgct
tatcaggaggatctgggcttcagtctcggtcagctggggaagagcggcagcgggcgtgtc
aggcaggctcaggtcaatgaggccaccaaagccagaatctccaaatctctccagaggact
ttacagaagcagagcatgacatacggaggaaagtccacagtcagagaccgctcctcagga
actagctccagtgtagcgttcactccccttcaggggctggagattgtgaatcctcaggct
gcagagaagaaggtggctgaagccaaccagaaatacttctcgaacatggcggagttcctc
aaagtcaagaaggaagctaagatgtga
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