Etheostoma spectabile (orangethroat darter): 116691543
Help
Entry
116691543 CDS
T08457
Symbol
u2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116691543 (u2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116691543 (u2af2)
Spliceosome [BR:
esp03041
]
Complex A
U2 snRNP components
U2 related factors
116691543 (u2af2)
Complex B
116691543 (u2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
116691543
NCBI-ProteinID:
XP_032375142
LinkDB
All DBs
Position
6:complement(10861295..10870359)
Genome browser
AA seq
485 aa
AA seq
DB search
MSDFDEFERQLSENKQVNRRSIPAAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDR
RGDSKERRHRRSSPTSFPQDNAGSRSPHREKKKNKVKKYWDVPPPGFEHITPMQYKAMQA
AGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQ
MRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY
QPLPGMSENPSVYVPGTQPINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLK
AFNLVKDSATGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTS
INQTPVTLQVPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYG
QVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYH
RRDFW
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgaattcgaaaggcagttatctgaaaacaaacaagttaataggcgc
tctattcctgcagctgaaagggacaaagaaaaccgccaccaccgccggtcttcctcccgc
agccgtagcagagagaggaaaaggaggagcagagacagggatagacgcagcagagaccgc
cgtggagacagtaaggagcgtaggcacagacgcagctcaccaaccagcttcccccaggac
aatgctggaagccgttctccacaccgtgagaagaagaagaacaaggtgaagaagtactgg
gatgtccctccacctggctttgaacacatcactcccatgcagtacaaagccatgcaagcg
gcaggccagatcccagccacagccctcctacccaccatgactccagatggcctggctgtt
actcccacccctgtaccggtagttggcagccagatgacccggcaggcccgccggctctat
gtgggcaacatcccctttggtatcacagaggagtccatgatggacttcttcaatgcccag
atgcgtttgggtggtcttactcaggcccctggaaaccctgtccttgcagtacagattaac
caggataagaattttgccttccttgagttccgttcagtagatgaaacaacacaggcaatg
gcctttgatggcatcatctttcaaggccagagcctcaagattcgtcgtccccacgattac
cagcccttgcccggcatgagcgagaaccccagtgtctatgtgcctggtacacagccaatt
aatggtgtggtgtccacagtggtgcctgactctgctcacaagctcttcattggcggcttg
cccaactacctgaatgatgaccaggtgaaggagcttttgacgtcatttggccccctgaag
gccttcaacctggtgaaggacagtgctacaggcttatctaaaggatatgcattttgtgaa
tatgttgatgtcaaccttaatgaccaggcaattgctggactgaacggcatgcagctggga
gacaagaagctcctggtccagagggccagtgtgggatccaagaacgccactctgacaagt
ataaatcagaccccagtaacgctgcaggtgccgggtctgaacagctcagtgactcaaatg
ggtggcctgcccactgaggttctgtgtctgatgaacatggtggccccagaggagctgcta
gatgatgaagaatatgaggagattgtggaggacgtcagggacgagtgcagcaagtacggc
caagtgaagagcatcgagatacctcgacctgtggacggcctcgaggtgcctgggaccggc
aagatctttgtggagttcatgtccgtttttgactcccagaaggccatgcaggggctgaca
ggaaggaagtttgccaacagggtggtggtgaccaaatactgcgatccagacgcctatcac
cgccgagacttctggtag
DBGET
integrated database retrieval system
