Etheostoma spectabile (orangethroat darter): 116691624
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Entry
116691624 CDS
T08457
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116691624 (cdh17)
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Major cadherins
116691624 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
RibLong
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
116691624
NCBI-ProteinID:
XP_032375285
LinkDB
All DBs
Position
6:complement(8770617..8785979)
Genome browser
AA seq
871 aa
AA seq
DB search
MTPITHLLLLPLLFSIAGAKDLEEKKGLFENTALNVPEGTPVPYPIYQFQVTHPGVSDFR
LSGEGKEDIRISKDGWLYLEKPLDWSRDDHYIIMVEALAGDEVVDGPVYVTINVLDINNN
APYFNQSTYTAVVRENNGAGIPFTRVFALDQDDPQTPNAHLSYSLVSQIPNNHHILLFQI
DPNTGEISTTEAGERMIKARQGIQYGKGEDRSIDALKTKFNDYCPVQNIPYEENPFFTCV
ERAEIRRRNVDPLEDPDYTLSVRVQDLEGASETSLSGNAIVHIVVQQNLWVNPGPIIVKE
HLKETYPLVIAKVQSNEPNAIYTLVQKEREMKFPFQITEDGEIHLTDELDREDKDMYILV
VFAVDSNDKQLDPPMEIQVIVEDLNDNAPVCANKESVFEVQEDEPVGSLIGQLLAHDDDQ
AGTLNAQLTFTIVSQNPPTTSNSFSIDAASGRIQSLSSLQRKDQQVYNLSVRVSDPVFST
ECEVVVKIIDVNNEMPQFEKNDYGSHTLAEDTPVGHTVLTISATDADDPDSGSSFIEFHI
TAGDNDNIFVVETDGKGVGHLVIAKPLDFESSPTYKLQIDARNPEPLMKGLEYGSKSTAF
VSVSVTDVDEAPEFSLDILDVTVPENTTKGSVLLTVEAKDPEGKEISFKMDGDTRGWLEI
DAATGEIKTKDKLDRETLETFEVTVTAFEKENPEKSSERVVSVRLLDVNDNFPKLMETQA
FICVKKPEPIIIKAQDTDSAPFSQPFTFSFIFAHGKKSPNWDLKSIDGTTAKLILKKQPT
EDKTFTLPINIRDNAGMGITQSFEVRVCNCTELGYCYFAPDERAFRLGMGPTIGILVGTL
GFCVIIFIIVIRRANKGGKKTTEEQERNALM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacacccataacgcatctgttgttgctcccactcctgttcagcatagctggtgcgaag
gatctggaggaaaagaagggcttgtttgagaacacggcactgaatgtgccagaggggact
ccagtgccatatcccatctatcagtttcaggtgacccatccaggtgttagtgatttcagg
ttgagtggagaaggcaaggaagacattaggatttcaaaagatgggtggctatacctggag
aagcctctggactggtctcgagatgaccattacattatcatggtggaggcgctggcaggt
gatgaagttgttgatggcccagtttatgtgaccataaatgtgttggacatcaacaacaat
gctccttacttcaaccagagcacctacacagctgtggtcagagaaaacaatggcgcaggt
atcccatttacccgtgtgtttgcgttggatcaagatgacccacagactcccaacgctcat
ctgagctacagcctggtgagccagatccccaacaatcaccacatcctcctgttccagatc
gatcctaacacgggagagatctccactacagaagcaggggaaaggatgatcaaagccaga
caaggtatccagtatggcaaaggagaggatcggagcattgatgctctgaagacaaagttt
aatgactactgtccagtgcagaatatcccctatgaagaaaaccccttcttcacttgtgtg
gagagagcagaaataaggaggaggaatgtagaccccttggaggacccagactacaccctg
tctgtgcgtgtgcaggacctggaaggagcgtcggagacctcgctgagtggaaatgccata
gtgcacattgtcgtgcagcaaaacctgtgggtcaatcctggacctataattgttaaagaa
cacttaaaggaaacatatccattagttattgcaaaggtccagtctaatgagcccaacgcc
atctacacgttagtgcagaaagagcgagagatgaaattccccttccagattacagaagat
ggagaaatacatctgacagatgagctggatagggaagacaaggacatgtacatcctagtg
gtgtttgcagtggatagcaatgacaaacagctggatccccccatggagattcaagtcata
gtggaggatctaaacgacaatgcaccagtgtgtgcaaataaggagagtgtgtttgaggtg
caggaggatgaaccagtaggtagcctgattggacaactgttggcccatgatgacgatcaa
gccgggacactgaacgctcagctgactttcaccattgtgtcccaaaatccacccaccaca
tccaactccttttccattgacgctgcttctggaagaatccagtcattaagctcgctgcag
cgaaaagaccagcaggtgtataatctcagcgtcagagtcagtgacccagtgttcagcaca
gaatgtgaggtcgttgtcaagatcattgatgtcaacaacgagatgcctcagtttgagaag
aatgattatggcagtcacactctggcagaggacactcctgttggacacacagtgctgacc
atcagcgcgacagacgctgatgacccagacagcggcagctcctttatcgagttccacatc
actgctggtgacaatgataacatttttgttgtggaaaccgacggcaaaggcgttggccat
ctggtcatagctaagcctctggactttgagtcctctcccacctacaagctccagattgat
gctcgtaacccagagccgctgatgaagggtctggagtacggcagcaaatccacagccttt
gtttctgtgtctgtcactgacgtggacgaggctccagagttcagtctggacatactggat
gtgactgtgcctgaaaacaccaccaaaggatcagtgctgctcactgtggaggcaaaggat
ccagaaggcaaagagatcagttttaagatggacggtgacactcggggctggctggagatc
gatgctgccactggagagattaagaccaaagacaagctggacagagaaaccttagagact
tttgaagtcactgtgactgcatttgagaaagagaaccctgaaaagtcttctgagcgagtt
gtgtctgtgaggctgctggatgtgaacgacaacttccctaaactgatggagacccaggcc
ttcatctgtgtgaagaaacccgaacctatcattatcaaggcccaagacacagacagtgcc
cccttctctcagcccttcaccttcagcttcattttcgcccacggcaaaaaatcacccaac
tgggacttgaaaagtatcgacggtacaacagctaaattgatcctgaaaaaacaaccaact
gaagataaaaccttcactctacccattaacattagagacaatgcaggcatgggaatcaca
cagtcgtttgaggtgagagtatgtaactgcaccgagctgggctactgctactttgcacca
gatgaacgtgccttccgtttggggatgggacccaccattgggatcctggttggcactctg
ggattctgcgttattatcttcattatagttataagacgtgcaaataaagggggcaagaag
acgactgaagaacaagagaggaacgccttgatgtag
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