Etheostoma spectabile (orangethroat darter): 116691626
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Entry
116691626 CDS
T08457
Symbol
irx2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116691626 (irx2)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116691626 (irx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Spherulin4
Motif
Other DBs
NCBI-GeneID:
116691626
NCBI-ProteinID:
XP_032375288
LinkDB
All DBs
Position
6:3269105..3274964
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AA seq
504 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNEDLARSSSGSAFSPYPGSAAFSASASA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTSGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGDGERKEVERSEKALDNSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
RGELGSGPAGNKCDEDGEDQNHDPRAQLSPISVTSSPLTGVEAPLLGHHHHHHHLHHLHH
IHSQREDLARSLVNSNTIHTNKSSSCLDSRPSAPQNPTVKPKLWSLAEIATSDQKQQHQQ
PGQPGQPNCPSSSGGLLTPPTSSTTSPTASSPSLYPAPSILGRPIYYTSPFYSNYTNYGN
FSPLQGQGILRYTNSSGVSLVAAAAAAAAAAAAAANEGLSSEASTNPKHRPDSPLVKNNP
NHTVVVEQQQQHFRSANLEAKKGT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctttattcgtgt
ccggcatacggggcctcggctctggctgccccgcggaatgaagacttggcgaggtcgtcc
tcgggctcagccttcagtccttaccctggatcggctgctttctccgcctcggccagcgca
ggcttctccagtccactgtcatactccacggatccaactacgggattcccatcctacatg
agctctccatatgacgcacacacgtcgggcatggccggggcattaagttaccacccatat
gggagtccagggtacccataccaactcaatgacccggcttaccgcaaaaacgccaccagg
gacgccacggccaccctgaaggcctggctgcaggaacacaggaagaacccgtacccgacc
aaaggggagaagatcatgctggccatcatcactaaaatgacgctgacgcaggtctccaca
tggttcgccaacgccaggaggaggctcaagaaagagaacaagatgacatgggcgcccagg
aacaagagcgaagacgaggacgaggaggacggggacggagagaggaaagaagtggagcgc
tctgaaaaagccctggataacagcgaggcttcagcagaggatgaaggtatcagcctgcac
gtggacactctgacggaccactcgtgctcggcagagtccgacggggagaaggtcagctgt
cggggggaactgggctctggcccggccggcaacaaatgcgacgaggacggcgaggaccag
aaccacgacccgcgggctcagctctcgcccatatccgtcacatcgtcgcctctaacggga
gtagaagctccacttctcggtcaccaccaccaccaccaccacctccatcatctccaccat
atccacagccagcgcgaggatttggcccggagcctcgtcaatagcaacaccattcacacc
aataaatcgtcttcatgcctcgacagcagaccttctgcgcctcagaaccctacagtcaag
cccaaattgtggtctctggcggaaattgctacctcggaccaaaagcagcaacatcagcaa
ccggggcagcctgggcaaccaaactgcccctcctccagcggtggcctcctcaccccccct
acgtcttccaccacctccccgactgccagttccccctccctctacccggccccctccatc
ctcggaagacctatttattacacttctcccttttatagcaattacacaaactatggcaac
ttcagccccctgcagggccaagggatcctgcggtacactaattcatctggagtgagtctg
gttgctgctgccgccgccgccgctgccgccgccgctgctgccgccaacgagggtctgagc
tccgaggcgagcacaaaccccaaacataggccagactcccccctcgttaaaaataaccca
aaccacactgtagttgtcgagcagcagcaacagcatttcagatccgcaaatttagaagca
aagaaaggtacgtaa
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