Etheostoma spectabile (orangethroat darter): 116691693
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Entry
116691693 CDS
T08457
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116691693
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116691693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116691693
NCBI-ProteinID:
XP_032375418
LinkDB
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Position
6:complement(3123142..3127651)
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AA seq
492 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKESPGVHPASFAAHTSPAFYPYSQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTXXXXTWFANARRRLKKENK
VTWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTE
GSREHRGGVGAGGELDSLEKRRAFALQAHEAFDKSKSTITAHPGSKENSDGNGNNTRVLS
PDRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPAATTHTPAPHHQLQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNHHHHHNQQQHLAAQQQPTSVVVS
PGAAALSNDSKAPAETHSPKHIEHENGVRSDSPPTQILKSSFRPIHDRSSLPSSARNPQD
ATQRVLTALSSA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccttcatcccggggagggagcacggaaatcggggga
agtccgtccgccaccgcagcggcggtcacctcggtgttgggcatgtacgccaacccgtac
gcacacaactacagtgctttcttaccttacaccagcgcggacttggctcttttctcacaa
atgggatcccagtatgagctgaaggagagccctggcgtccatcccgccagctttgcagcc
cacacgtctccggccttctacccgtacagccagttccagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaag
aacccgtacccgaccaagggggagaagatcatgctggccatcatcaccaagatgacgctg
acgnnnnnnnnnnccacgtggttcgccaacgccaggaggaggctcaagaaggagaacaag
gtgacctggggcagcaggagcaaagaggacggggaggacgggaacttgttcggcagcggc
gacgaggcggagaaaaacgaagacgaggaggagatcgatttggagagcatagatatagac
aaaattgacgacaacgacggggaccagagcaacgaggacgatgatgataaatccacggag
gggagcagggagcacaggggcggcgtgggcgctgggggggagctggacagcttggagaaa
agacgagctttcgccctgcaggcccacgaggcctttgacaaatctaagagcacaattaca
gctcacccagggagtaaggagaactcggacggcaacggcaacaacaccagagttttatcc
ccggatagacccgggagctttcctctcccgtctaacaacaagccgaaaatatggtcttta
gccgaaacagccactagtcccgatagttcctctcagaaacccacgtccccgtgtggccca
gcggccaccacacacacaccagcgccccaccaccagctccagacccacccggccttcctg
cccagtcacggactgtacacctgccagattggaaagttccacaactggacaaatggggct
ttcctgggccagaactccctgctaaatgtgaggtcgtttctgggagtaaaccatcaccac
caccacaaccagcagcagcacttggcggcccagcagcagccgacttcagtggtggtgtcg
ccgggagcagcagcactcagcaacgacagcaaggccccggcagagacgcacagtcccaag
cacatagagcatgaaaacggtgtaaggtccgattcaccgccaacgcagatcctaaagtct
tcctttcgacccatccatgacagatcctctctgccttccagcgccaggaatccacaagac
gccacgcaacgagtcctcaccgctctctcctcggcttga
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