Etheostoma spectabile (orangethroat darter): 116691912
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Entry
116691912 CDS
T08457
Symbol
rtel1
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esp03032
]
116691912 (rtel1)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
116691912 (rtel1)
DNA replication proteins [BR:
esp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116691912 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
116691912
NCBI-ProteinID:
XP_032375717
LinkDB
All DBs
Position
7:24196480..24239009
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AA seq
1238 aa
AA seq
DB search
MPSLSLRGVTVNFPFPPYDCQVDYMNKVIECLQKKENGVLESPTGTGKTLCLLCATLAWR
ESFKDSISARKIAERLGGEEMFPKTPLSSWGTAATDGDTPTYYTDVPKIIYASRTHSQLA
QVINELKNTSYRPKVCAXGQEQLCINQEVMRQENNHVKVHMCRAKVSTRSCVFYNNVEER
STDRDLANNILDVEDLVKFGNKQRVCPYYLSRSLKQQADVVFMPYNYLLDPKSRRAHNIE
LNGAVVVFDEAHNVEKTCEESTSFDLTPYDVASAITAVDRLLVEQAKEVRHGDPVQDFNV
ESLNSGFKMTVETIAKIKQILLNLEAAVDSYEVPSEKGITKPGIFIYELLERAHLTYNSK
TEVYEALEQILGHLTGQQGVFLNTTGLQKLANIIQLVFCGEPSEKERQQQMELNTVCFKV
HIHRDNSFHKKTSGADAWAATSTKKQGNILSYWCFSPGFSMQDLENQGVRCIILTSGTLS
PLSSFTSEMRINFPVSLENRHVIERDQIFVGVIDRGPDGVHLSSAFDRRFVPENMASLGS
TVANLSRVVPDGLLVFFPSFPLMEKTLDFWRANGHADRIENVKPMFVEPKGKGNFSEVID
GYYSKVNDPTSKGGTFFAVCRGKASEGLDFADSFGRGVIITGLPFPPRMDPRVVLKMQFL
DEMSRKKTSGAKYLSGQDWYRQQAFRAVNQAIGRVIRHKEDYGAILLCDQRFTSSNARAQ
LPSWVRPYVRLYAGFGNVIRDVSQFFRVAQKMRPVVEKKSAAASCEKESFPDPLQFPGFT
SCSSSSSQSPHTQKAKVLDAHLPSLKRRKLNEHTGANGMARICVEYECELQESQKRPANL
LDALDRGDHRREDDDSAVGEEKADRLSTLSLRCDKRMDDESRGGKRKIKLVQEQKPSASG
TVSERGTASRVKDFLAEMKTSLSQISFDRIIKALQTYKKTDNLDVLLTETAVLTQDANTH
SLLRGLYQFIRPHHKRSFDETCQQLTGTGCGYKPDHSLSADEKKALMLQSAAASHPVGGP
GSCSHPVGGPGSCSHPVGGPGSCSHPVGGPGSCSQLNTQQLNKGGQHLNQHAAVSHPAGG
PGSSSCTPACSQLNTQHLNKGGQHLNQQGPTQPPSGSGPSRDVPASFLXDVKKAVGAEKS
AQLFQVIQSYKKTDNYDDLVATVVSLFTERDEDFNLLVRFGMFIPARHKKRYKEMLDGLI
GNSVSGVPAETEDQQRPATSSPKTQSKISSFFSNSQRK
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactctccctcagaggagtgacggtgaacttcccctttcctccgtatgactgt
caggtggactacatgaacaaagtgattgagtgtctccagaagaaggagaacggggtcctg
gagagtcccacgggtactggtaaaaccctgtgcctgctgtgtgccaccctggcctggaga
gagtccttcaaggactccatctccgcccgcaagatagcggagaggctgggcggggaggag
atgttccccaaaacaccgctgtcctcctgggggacggctgctacggacggcgacacgcca
acctactacaccgatgtccccaagatcatatacgcatcccggacgcactctcagctggcg
caggtcatcaacgagttaaagaacacttcatacaggcctaaggtgtgtgctnggggtcaa
gagcagctgtgtatcaaccaggaagtgatgcgtcaggagaacaaccacgtcaaggtccac
atgtgcagagcgaaggtctccacccgatcgtgtgtcttctacaacaacgtggaagagagg
agcaccgacagagacttggccaataacatcctcgacgtggaggacttggtcaaattcggc
aacaaacagagggtctgtccttactacctgtcccggtccttgaagcagcaagcagacgtg
gttttcatgccgtacaactacctgctggatccaaagagccgcagagcgcacaacatcgag
ctgaacggcgccgtggtcgtcttcgatgaggctcacaacgtggagaagacgtgtgaagaa
tccacatcctttgacctgaccccctacgacgtagcctcagccatcacggctgtggaccgg
ctgctggtggagcaggctaaagaagtccgccacggagacccggtccaggacttcaacgtg
gagtccctcaactctggttttaaaatgactgtggagaccattgctaaaatcaaacagata
ctcctgaatctggaagctgccgtcgattcctatgaagttccgagtgaaaaaggcatcacg
aaacctggaatcttcatctatgagctgctggagagagcccacctgacctacaacagcaag
acggaggtctacgaagctctggagcagatccttggacacttaacaggacagcaaggagtg
ttcctgaacacaacggggctgcagaagctcgctaacatcatacagctggtgttctgcggg
gagccgtcggagaaggagcggcagcagcagatggagctcaacacggtgtgttttaaggtc
cacatccatcgagacaacagctttcacaagaaaacctcgggcgccgacgcgtgggcggcg
acgtcaacaaagaaacaaggaaacatcctgagttactggtgcttctctccgggcttcagc
atgcaggacctggagaatcaaggtgttcgctgcatcattctgaccagcgggaccctgtcc
ccgctgtcctccttcacctctgagatgaggataaatttccccgtgagtctggagaaccgt
cacgtgatcgagcgggaccagatctttgtcggcgtcatcgaccgcggccccgacggcgtg
catctaagttcagcgtttgatagaaggtttgttcctgagaacatggcgtctttaggcagc
actgttgccaacctgagccgcgtggtccctgatgggctcctggtcttcttcccctccttc
cctttgatggagaaaaccctggacttctggagagccaacggacacgcggatcgcatcgag
aacgtaaaacccatgttcgttgaacccaaagggaagggcaacttcagtgaggttattgac
ggatattacagcaaagtcaacgatccgacgtccaaaggaggaactttctttgccgtgtgt
cgcgggaaggccagcgagggtctggactttgcggactcctttgggcggggggtgatcatc
accggcctccccttccccccgaggatggacccccgagtcgtcctcaagatgcagttcctg
gacgagatgagtcggaagaaaacttccggcgcaaagtacctgtctggacaggactggtac
cgacagcaggccttccgagccgtgaaccaggccatcgggagagtcatccgccacaaggag
gactacggagccatcctgctgtgtgaccagaggttcaccagctccaacgccagggctcag
cttccgtcgtgggtccggccgtacgtgcgtctgtacgccggctttgggaacgtgatccgt
gacgtctctcagttcttcagggtcgcacagaaaatgaggcctgtggtggagaagaagtct
gcagcagcaagctgcgagaaggagtctttccccgaccctctccagttccctggcttcacg
tcctgctcctcctcctcctcccaaagcccccacacccagaaggccaaggtgctggacgcc
cacctacccagcctgaagaggaggaaactcaacgagcacaccggagccaatgggatggcc
aggatctgtgtggagtacgagtgtgagctgcaggagagccagaagagaccggccaacctg
ctggacgccctggaccgaggggaccatcgcagagaggacgatgactccgctgtgggagaa
gagaaggccgaccgtttgtccacgttgtctcttcgatgtgacaagaggatggacgatgag
tcgcggggcggaaaacgtaaaatcaaactggtccaagaacagaaaccgagcgcgtcgggg
accgtctccgagcgggggacggccagcagggtgaaggacttcctggcagagatgaagacg
tccctgagccagatcagctttgaccgcatcataaaggccctgcagacctacaagaagacg
gacaacctggacgtcctgctgacggagacggctgtcctgactcaggacgccaacacgcac
agtctgctgcggggcctctaccagttcatccgcccgcatcacaagaggagctttgatgag
acgtgccagcagctgacggggacgggctgcggatacaaaccggatcactcgctctctgca
gacgagaagaaggcgctgatgctgcagagcgctgcagccagtcatcctgttggaggtcca
ggttcctgcagtcatcctgttggaggtccaggttcctgcagtcatcctgttggaggtcca
ggttcctgcagtcatcctgttggaggtccaggttcctgcagtcagctgaacacacagcag
ctcaacaaaggaggacaacacctcaaccagcacgctgcagtcagtcatcctgctggaggt
ccaggttcctccagctgcacgcccgcctgcagtcagctgaacacacagcacctcaacaaa
gggggacaacacctaaaccagcagggaccgacacagcctccctctggctccggtccaagc
agagacgtccccgcttccttcctgngcgacgtgaagaaagccgtcggagcggagaagtcg
gctcagctgtttcaggtgatccagagctacaagaagacggacaactacgacgacctggtg
gccacggtggtgagcctgttcacggagagagacgaggacttcaacctcctagtcagattt
ggcatgtttatccccgctcgccataagaagcggtacaaagagatgctggatgggttgata
gggaactctgtctctggggttcctgctgagaccgaagaccagcaacgaccagccacgtcg
tctccgaagacgcaaagcaagatttccagtttcttctcaaacagccaaagaaagtaa
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