Etheostoma spectabile (orangethroat darter): 116691917
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Entry
116691917 CDS
T08457
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116691917 (vps52)
Membrane trafficking [BR:
esp04131
]
Protein recycling
Others
EARP complex
116691917 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
116691917 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF5740
CoV_NSP7
Motif
Other DBs
NCBI-GeneID:
116691917
NCBI-ProteinID:
XP_032375723
LinkDB
All DBs
Position
7:complement(24554936..24584805)
Genome browser
AA seq
724 aa
AA seq
DB search
MAQVAAAAVGAGPDVNAAGNPTENAMAYLQDEKTDGDIANLNLGELDLTTDEFILDEVDI
HIQANLEDDLVKEALKTGVDLRQYSKQVESELQRIEQVSIKDYIKESQNIALLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPG
VMISTILDSPVTEQEFLEQLHELNNKINFAKELSFRETLACADIQDIVDRLKLKAVSKIR
EFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSY
FKSYSSRLLKVQYEEVADKDDLMGVEDTAKKSFFSKPSLKSRNTIFTLGQRGGILSPTEL
EGPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREYLFLSDFFMVTGNSALDLFNSIM
GKTLSMFLKSMSTYVSDCYDSIAVFLCIHIILRFRAITAKRTIPALDKYWEAVLELLWPR
FELILEMNIHSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTHTLLGQL
QVEVENFVLKMAAEFPSRRDQLIFLINNYDMLLSVLMERAADDSKEVEGFQQLLLARTQE
FIEEILSPPFGGMIAFMKEAEALMEKGQLDRLKNEEARITQLVRGFSSTWKQSVESMSQD
VMRSFTNFKNGTSIIQGALTQLIQYYHGFHKVLNQPTFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtagctgcggcagccgttggagctggtcccgatgtgaacgcagctggaaac
ccgacagaaaacgccatggcgtatctacaagacgagaagactgatggagacatcgcaaac
ctcaacctgggagaactggacctcaccaccgatgagtttatcttggacgaagtggacatc
cacatccaggccaatctggaagatgatctggtgaaggaggcgctcaaaacgggcgtcgac
ctccgtcagtactccaagcaggtggagtcagagctgcagaggatcgaacaggtctccatc
aaggactacatcaaggagagtcagaacatcgctctgctgcacaaccagatcaccgcctgt
gactccatactggagcgtatggagggcatgctgagcggcttccagagcgacctgtcctcc
atcagcagcgagatccagaccctgcagcagcagtcggtcagcatgaacgtccggctgaag
aacaggcaggcggtgcgcagccacctcagccagctggtggacgaactggtggtgcccgga
gtcatgatctccaccatcctggacagcccagtgacggagcaggagtttctggagcagctc
cacgagctcaacaacaagatcaacttcgccaaagagctgagcttcagagagacgctggcc
tgcgccgacatccaggacatcgtcgaccgcctcaaactcaaggcggtgtcaaagattcga
gagttcattcttcagaagatctactcgttcaggaagccgatgacaaactaccagatccca
cagaacacgctgctgaagtacagatttttctaccagttccttttggccaatgagagaacg
gtcgcaaaggagatcagagacgagtacgtggacacgatgagcaagatttactacagctac
ttcaagtcgtacagcagccggctgctcaaagtgcagtacgaggaggtcgcagacaaagat
gacctgatgggagtagaagacacagccaagaaaagtttcttctccaagccgtctctgaag
agcaggaacaccatcttcactctgggccagagggggggcatcctgagtcccacggagctg
gaggggccgatcctggtcccgcatacggctcagagaggagacagcaggtatccgtatgag
acgctgttccgcagccagcactacgcgctgctggacaacggctgcagggagtacctcttc
ctctccgacttcttcatggtgacgggaaactccgccctcgacctcttcaacagcatcatg
gggaagacgctcagcatgttcctgaagagcatgtccacgtatgtgtccgactgctacgac
agcatcgccgtcttcctctgcatccacatcatcctgcggttccgagccatcaccgccaag
aggaccatccccgccctcgacaagtactgggaggccgtgttggagctgctgtggccaaga
ttcgaactgattctggagatgaacatccacagcatcagaaacacagaccctcagaaacta
ggagtactggacaccagaccacactatatcactcgtcgctacgcagagttctcgtcggcc
atcgtcagcatcaaccagacgtttcccaacgagagaacccacactctgctggggcagctg
caggttgaggtggagaactttgtgctaaagatggcggcggagtttccctccagaagagac
cagctcatcttcctcatcaacaactacgacatgttgctcagcgtcctcatggagagggca
gcagacgacagtaaagaggtggaaggtttccagcagctgctcctggcccggacacaggag
tttatcgaggagattctgtccccccccttcggagggatgatcgccttcatgaaggaggcc
gaggctctgatggagaaagggcagctggaccggctaaagaacgaagaagctcggatcacg
cagctggttcgtgggttttccagcacgtggaagcagtcggtggagtcaatgagtcaggac
gtcatgaggtccttcaccaacttcaaaaatggaaccagcatcatacagggcgccctgacc
cagctgatccagtactaccacggcttccacaaagtcctgaaccagcccacgttccgcagc
ctggcggtccgctcggagctcatcaacctgcaccacctcatggtggaggtgaagaagcac
aagcccaacttctga
DBGET
integrated database retrieval system
