Etheostoma spectabile (orangethroat darter): 116691990
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Entry
116691990 CDS
T08457
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116691990
03015 mRNA surveillance pathway
116691990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116691990
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116691990
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116691990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116691990
NCBI-ProteinID:
XP_032375828
LinkDB
All DBs
Position
7:29733875..29740861
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AA seq
487 aa
AA seq
DB search
MSEDSWAVAVDFQEATNPSTQFDFSKKVERVLGPRDIRRDINGNILPEKTENGGSKRDAE
KVDLAEQSLLNKMIRRFLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLQGVYHLGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPDNKWTQCLCIAPTY
ELALQIGQVIEQMGACCPDVKLAYGIRGNRPERGVKLQEQIVIGTPGTVLDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTRDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAN
LTNEGHQVALLSGELTVEQRAAVIDRFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMEGNADNETYLHRIGRTGRFGKRGFAVNMVDSKHSMGVINQIEMHFNRRITKLDTSNLE
EMESLIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcggttgctgtcgattttcaagaagccacaaatccatccaca
cagtttgacttctcaaagaaagttgagcgagtgcttggccctcgtgacataagaagagac
ataaatggtaacatattgccagagaagactgaaaatggaggttcgaaaagagacgcggag
aaagtggacctggctgaacagtccctgttaaataagatgatccggcgctttctggtgcgg
aacagaaaccaggtggaggtcctgcagcgggaccccacctctcccctttactccgtcaag
acattcgaagagctgagactgaaacctgagctgctgcagggtgtgtaccacctggggttc
aacagaccctccaggatccaggagaacgccttgcccatgatgttggcacagccacctcag
aatctgatcgcccagtcccagtctggcacgggtaaaaccgctgctttttctcttgccatg
ctcagccatgtaaacccggacaacaagtggacccaatgcctttgcatcgcaccaacatat
gagctcgctctgcagatcggccaagtaatcgagcagatgggggcatgctgccctgatgtg
aaactggcttacggcattcggggcaacagaccggagcgaggcgtcaagttgcaggagcag
attgtcattggaacaccaggcacagtcctcgactggtgcaccaagtacaagctcattgac
cccaagaagattaccatgtttgtgctcgacgaggctgatgtgatgatcgccacgcaaggc
catcgggaccagagcattcggatccacagacagctgaccagggactgccagatgctcctt
ttctctgcaacctttgaggactccgtgtggaggtttgcagagcaggtggttcccgatccc
aacatcatcaggctgaagcgggaagaggagacactggacacaatcaagcagttctatgtg
ctctgtagggagaaggaggacaagttcacagcactctgtaatctttatgggagccttacc
attgcacaggccatgatcttttgccatactcgcaagatggctgcttggctgaccgcgaac
ctgaccaacgagggccaccaggtggcattgctgagcggggagttgaccgtggagcagagg
gccgccgtcatcgatcgcttcaggaacggcaaggagaaggtcctggtgaccacaaacgtg
tgctccaggggtatcgatgtggaacaagtgtctctcgtggtcaactttgacctccctgtg
gacatggaagggaacgccgacaacgagacctacctgcaccggattggccgcacgggacgc
tttggcaaaagaggatttgccgtcaacatggttgacagcaaacacagcatgggtgtcatc
aaccaaattgagatgcatttcaaccggagaatcacgaaacttgacacgagcaatctcgaa
gaaatggaaagcctgatcagctga
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