Etheostoma spectabile (orangethroat darter): 116692003
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Entry
116692003 CDS
T08457
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116692003 (nphp4)
Cilium and associated proteins [BR:
esp03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116692003 (nphp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
116692003
NCBI-ProteinID:
XP_032375847
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All DBs
Position
7:17014361..17175691
Genome browser
AA seq
1458 aa
AA seq
DB search
MVKTEDISTTAGGWREVFERSRVVPPPSQTVRLAVESHFTQSHGFQLSLSRLTAAHLPQE
ISEGDHDVTFQLRVTLFDRNHQHFFGKTWKSSPQRMKNNKISFNEVLYFHTSLRLPSVVV
VLELVLLSPRPGSSQQALGRGFTVLELFTNRPEAQAADGDRRLNLYNGSPRSLLHPHLKD
SVDYSSILKAIDGAHLECVIKNHPALVSVMHLLPENVLISGNENIPGLAASPTGDALLKP
HLLKTLPFTLNRLTISLQPSLEKFESQLLQLINADCHNTKQLGSESALRTVVIQERRLHV
GVHNGWCFLDKPQVVVLEPLASGARGRSDSTSKLSTLVRESSATSSLPQMLGLRSSLELR
LTNHQALAVVFQLEYVFSAPIGRETMLSATSTSRAAFLQCLRWGIWCPFQEPADWKGEDI
QLVLQAGAKPNPHGVMVYSTEMSAKTQSPLPLSAPGTAQEARDSITFRLSSSLERKASSP
KASLRTKQEDVPRQRRSPSSPLQGQKSIPPASPPESPQGPGLSLSQLAATSRYPTISHSS
SALPWQQSFPSLLHPSPLTSAHQLSHVAYSGVSNIAHLEMDLQRKGDVSASAQDEGDQLQ
ELPFTPVHAPVITLGMNVPSSCSVSSRSSLAHLYSAGFPDITDCSGQVAEVLDPTEPVPF
DPQREETDPLQGNLLVFQFLAFTRIPTAGVGPDWPDNIYFTFQFYRFPPVTSQQLKLLTS
DKVQLKTCVPCVLASINKDGTVNSGSPGLQVHFRVDEGFLKPGEKRWFLRYLALHTMHID
IWNSDSLLLIGSTAIELKYMLRQGKSAVQALHEVEVLTTDYVGEDTPLTSADVGRQSTLS
PMTVHTIIRGRLHIRTGNIGCQVEPSRRRAADVMPSHSHIITPRKVTGGFRGGSLSSRNI
FQLNARNAAQAHRLERDGDHVPLFRRGVKADTIAAGELNLNELDGGRRKLNCMAAVHQRE
GREDAKETEVTDRSKEARLVTELKQIKPSEKHSKAEGIANMLSQAITTQHLLYASLGCAE
YMEFVLKNPFNAPQTVTIHSDDPELSVITNTEEWGYFKALTKTPTPLEENMFHLERGAPG
PRVYLRPKESIHIPLKYQSFLCDHTMALQGPSFLPTGKGSQVAKKNLSNIVAAKTIKVTF
QAEDGKPIAICQVNVEPTPHVVDQAFRLYHPELCFLKKAIRLPPWHDLTDSTVGDSDVRT
HISVRCSDPNIICQTRMLVPGEPQDVYLKVPGSPSPHIKMFFVMVFTDKWMAAPSQIWQI
YVHFLERVDVSCVTGQRSCQSLVLRGKQAVRKVKCFSSHPQEIEVDPEGVFVLPPAAMQE
LQLKVQPWQAGSRFLYVNAVDVENRRLVTAWLLCLNVHRPVLSKAFEVCVPGSGGRGSSR
KITYTNPYSSSRTFLLRSDHPDLLQFKEDKFQIGGGETYTIGLRFAPSQSPGSVEILVYV
NNLEEKTEETFCVKVNYS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaacagaagacatatccaccacggcgggcggctggagagaagtgtttgaaaga
agccgggtggttcctccgccaagtcagacagtccgcctggctgtggaaagccacttcacc
cagtctcacggcttccagcttagccttagccggctcactgcagctcacctcccgcaggag
atatcagagggggatcatgatgtgaccttccagttgcgagtgaccctgtttgatagaaac
caccagcacttctttggaaaaacatggaagagctcacctcagaggatgaaaaacaacaag
atctccttcaatgaggtcctgtacttccatacgtctctgcggttgcccagtgtggtggtg
gttctggaactggtgttgttgtcaccaaggccaggcagctcccagcaggccctggggcga
ggcttcactgtcctggagctctttaccaacaggccagaggctcaggctgctgatggggac
agaaggctgaatctatacaatggatcaccaagaagcctcctccatccccacctgaaggac
agtgttgactacagcagcatcctgaaggctattgacggagcacatttggaatgtgtgata
aaaaaccaccccgcactggtttccgtgatgcacctccttccagagaatgtccttatatct
ggaaatgagaacattcccggccttgcagcttctccaacaggagatgctctgctgaagcct
catctgctcaaaacgctgcccttcaccctgaacagactgaccatctccctccagccgtcc
ctggagaagtttgagagccagctgctgcagctgatcaatgctgactgtcataacacaaaa
cagctaggatctgagagtgcactgaggacggttgtcatccaggaaaggagacttcatgtc
ggggttcacaatggctggtgttttctcgacaagccccaagtggtggtgctggagccccta
gcatcaggggccagaggccgatcagacagcacctccaaactgagcaccctggtcagggaa
agctctgcaacatcatccctccctcagatgctgggccttcgcagcagcttggagctcagg
ctgaccaatcatcaagctttggcagttgtcttccagcttgagtatgtcttctctgctcca
attggccgagagacgatgctgtctgccacctccacatcccgagcggccttcttgcagtgc
cttcgttgggggatttggtgcccattccaggagccggctgactggaagggggaagatata
cagcttgttctacaagcaggtgcaaagccaaaccctcacggagtcatggtctacagcaca
gagatgtctgccaaaactcagagccctctgccactttcagctccaggcacagctcaggag
gcaagggattccataacatttcggctgtcatccagtctggaaaggaaggcgtctagccca
aaggcatctctgaggacaaagcaggaggatgtgccacgtcagagaagatcaccttcatca
cctttacagggtcagaaatcaattccaccagcttctcctccagaatctcctcaaggcccc
gggctttcactgtctcaactggcagctacttcacgctacccaaccatcagccactccagc
tcggcgttgccttggcaacagtcgtttccttctttgctccatccttccccattgacatcg
gctcaccagctgtcacatgtcgcctactcaggtgtcagcaacattgcccacctggagatg
gaccttcagcggaaaggggatgtgtcagcttcagctcaggacgaaggagaccagcttcag
gagctgccctttacccctgtccatgcccctgtcatcactctggggatgaatgtgcctagt
tcctgctcagtcagctccaggagctcactggctcacctttactccgctggcttccccgac
atcacggactgtagtgggcaggtggctgaagtcctggaccccacagagcccgtgcccttt
gaccctcagcgtgaggagactgacccactacagggcaacctgctggtgttccagtttctg
gcgtttaccagaataccaacggcgggtgttggtccggattggcctgacaacatctacttc
accttccagttctatcgctttccaccagtcacatcgcagcagctcaaactactgaccagt
gacaaggttcaactgaaaacttgcgttccctgtgttctggcctccatcaacaaagacggc
actgtcaactctggctctccaggtctgcaggtgcacttcagagtagatgagggtttcttg
aagccaggagagaagcgttggttcctgcgctacctggccctccacaccatgcacatcgac
atctggaacagcgactcattgctcctcataggttccactgccatcgagctcaagtacatg
ttgcgtcaaggtaaatcggcagtgcaggcccttcacgaggtggaggtgctgaccactgat
tatgtgggagaggacaccccgctgactagcgcagatgtgggccgacagtcaaccctcagc
cccatgacggtccacaccattatcaggggccggctgcacatacgcacaggcaacataggg
tgccaagtagaacctagcaggaggagagcagcagacgtgatgccgtctcattctcacatc
atcacacctcgcaaagtcactgggggcttcagaggaggaagcctttcctccagaaacatc
ttccaactcaatgcgaggaacgctgcacaagcccacagactggagagagatggggaccat
gtgccattgttcagacgcggggtcaaagctgacacaatcgcggccggagagctcaaccta
aacgagctcgacggtgggcgccgcaagctcaactgcatggctgcagtgcatcagcgggag
ggcagggaagatgctaaagagactgaggtcacggatcggagtaaggaagcccggttggtc
acggaacttaaacagatcaaacccagcgaaaagcacagcaaggcagagggcatcgccaac
atgctgagccaggccattaccacccagcacctgctctacgccagcctgggctgtgctgag
tacatggagtttgtccttaaaaatccctttaatgcacctcagactgtcaccatccacagt
gatgaccctgagctaagtgtcatcactaacacagaggagtggggttactttaaagcacta
accaaaactccaaccccgctggaggagaacatgttccacttggagagaggtgccccaggt
cccagagtttacctccggcccaaggagagcatccatattcccctgaaataccagagtttt
ctctgcgaccacaccatggcccttcagggaccaagcttcctaccaacaggtaaaggttcc
caagtggccaagaagaatctgtccaatattgttgctgccaagactatcaaggttacgttc
caagcagaagacggcaagccgattgccatctgccaggtgaacgtggagccgacgcctcat
gttgtcgaccaggctttccgtctttatcaccctgagctctgcttcctcaagaaagccatt
cggttgccgccctggcatgacctcacagatagcacagttggggattcagatgtcaggact
cacatttccgtacgctgcagtgaccctaacatcatctgccagacaaggatgctggtacca
ggggagcctcaggatgtgtacttgaaagtgccaggaagtcccagtccacacataaaaatg
ttttttgtgatggtttttactgataagtggatggcagcgccctcccagatctggcagatt
tacgtacatttcctggagcgggtggatgtcagctgtgtgactggccagcggagctgtcaa
tcactggtactgagggggaagcaggctgttcgcaaggtcaaatgcttctcatcacacccc
caggagattgaggtggacccagagggtgtgttcgttttgcctcccgcagcgatgcaggag
ctccagctgaaggtgcaaccctggcaagcaggaagccgcttcttgtacgtgaatgcagtg
gacgtagagaaccggcggctcgtcaccgcctggctgctctgtctcaacgttcaccggcct
gtactgtccaaggcatttgaagtgtgtgtaccaggcagtggtgggcgtggcagctccagg
aaaatcacctacaccaacccttacagcagcagccgtacatttctgctccgctctgaccat
ccagacctgctccagttcaaagaggataaattccagatcggggggggagagacttacacc
atcggactgcgattcgcccccagccagagtcccggctcagtggagattctggtctatgtg
aacaacctggaggagaagacggaggagacgttctgtgtgaaagtcaactactcatga
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