Etheostoma spectabile (orangethroat darter): 116692087
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Entry
116692087 CDS
T08457
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116692087 (pym1)
03015 mRNA surveillance pathway
116692087 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116692087 (pym1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116692087 (pym1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
DUF2152
Caudo_TAP
FAM176
MMPL
Motif
Other DBs
NCBI-GeneID:
116692087
NCBI-ProteinID:
XP_032375988
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All DBs
Position
7:28448712..28455797
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AA seq
228 aa
AA seq
DB search
MSNVTDQPSEGSGATRNTKMATPYVTDESGKYIAATQRPDGTWRKPRRVKDGYTPQEEVP
VYENKFVKFFKSKPDLPPGMNPAEGAPTKQQQKIPGCGDSETAGLSKSAKRNMKRKEKRK
HQQHQDGDVDADVDSVSDAVENVSISDCAESSNKTKAPVSASSPSDSSAEAAEKAKKIKG
LKKKLRQAEELQQKVDSGEITEPTKDQLEKLGRVKILQDELQQLERDS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgttaccgaccaaccgagtgaggggagcggggcaacacgtaacaccaaaatg
gcaaccccctatgtcacagatgaatctgggaaatacattgctgccactcagcgacctgat
ggaacatggaggaagccgaggcgggtgaaggacggttataccccccaggaagaagtgcca
gtctacgaaaacaagtttgtgaagtttttcaagagcaaaccggacctgccacccgggatg
aacccggccgagggcgctccgacaaagcagcagcaaaagatccccggctgcggggacagc
gagacagccggtctgtcgaagtctgccaaacgcaacatgaaacgcaaagaaaaacggaaa
caccagcagcaccaggacggcgacgtcgatgcggacgtggactcggtgagcgacgctgtc
gagaacgtgtccatttcagactgcgcggagtcttcaaacaagacgaaggcgccggtttct
gcctcgtctcccagtgattcgtcggcagaagcagccgaaaaggccaagaagatcaaaggc
ctgaaaaagaagctgcggcaagctgaggaattgcagcagaaggtggactcaggggaaata
acagagccaacaaaggatcagttggaaaagctgggtcgggttaagatcttacaagatgag
ttacagcagctcgagcgtgactcttga
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