Etheostoma spectabile (orangethroat darter): 116692138
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Entry
116692138 CDS
T08457
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116692138
04517 IgSF CAM signaling
116692138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116692138
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
L1 family
116692138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
C2-set_2
Fn3_ROS1
Pur_ac_phosph_N
Ig_PDGFR_d4
BiPBP_C
V-set_CD47
DUF6724
Motif
Other DBs
NCBI-GeneID:
116692138
NCBI-ProteinID:
XP_032376072
LinkDB
All DBs
Position
7:complement(2607017..2625971)
Genome browser
AA seq
1202 aa
AA seq
DB search
MRENGRVGKEKSRLVPCTVKMGPLLEPALLLLLLLLWPSVWAFDIPLEIRQPPTIIKQSM
KEHIVDPKDTMVIECEAKGNPHPIFSWRRNGKYFNVARDAQASMRRRSGTLDIYAWNNPE
QYEAEYQCIASNEYGSAYSHKIRLRLYRAPVWPREVLEPVVVSAGLPLVLSCDPPPGPPK
PEIYWMSSCSYARPFNWPIQTAFPTMQPVRQDRRISMGVNGDLYFSNVLFNDSAADYCCN
ARFPYKNVIQQKMPVVVKVLTTRTVSEAAPTWLSPTGSSSSILVLQGEELLLECIAAGMP
TPRITWTKDGDDLVVTPRMKVKNFSKMIQIPKASFDDVGEYTCTATNNIGYIEHTITVRV
KAAPFWLEKPTNLVLAPEENGRLVCRSDGAPRPTISWFINGEPIETATPQPNRQVAGDTL
TLRSVTAENTAVYQCNASNQYGYLMANAFVNVLHATPRIFGPRNELIKVTEGSRCFLDCR
YFGSPVPELRWSKYGQGNLEGNRFKIHSNGTLEIKHIRIDDQGIYLCVVSNIAGREESQV
RVEVKEPTLIVTRPQSMKVIRGSDVRFECGVKADVTTPVTTTWMKDKKYVTLGWRLSLDE
SNLIITNVNRGDEGNYTCVIKSELDQKSASARLMVMDRPDPPTKLELSDPYERSVRLSWV
PGDSNHNPITEYIVQYDDDDWLPGKWRNLSSYPGDLNSVILHLTPFTYYEFRVIAVNAIG
MSRPSRPSTRFQSSGAPPDVIPKNVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRR
RESREEWKNATTKWARYYIYDADTFTPYDIKVQAVNDFGLGPESPVIIGYSGEDRPLTAP
LNLRVSDIESTQVTLHWDSVTRGSMMGSLKEYKAYYWRDSSQLRWLRVNRGMKSKSFPDN
DPEPSGVLTGLIPYSNYKLYLVVANNRYEGPPSNNIHFSTPEGVPSAPTSFRIQQRHLDS
IYVDWDLPAEPNGIITGYSLKYQTVNATRGEELRVEELTPNITSFSLRRYDRYTRYRFYV
AARTRIGIGEWHMEESPHYTTETYAQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRS
RGGKYPVREKKDISLEPVDDKDQDGTFDYRSLERITRVSTLPYPRRDEERGLQRSQPSME
AMIKRSDSDDSLVDYGEGGEIPFNEDGSFIGQYTGTRRDVRELDFGGSLELHSPMNTIYS
LA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaacggaagagttggtaaagaaaagagtcgcttggttccatgcactgtgaag
atgggaccactgctcgaaccagcgctgctgctgctgctgctgcttttatggccgagtgtt
tgggctttcgacatccctctggaaatcaggcagcccccaaccatcataaagcagtcaatg
aaggagcatattgttgaccccaaagacaccatggtcatcgaatgtgaagccaagggaaac
cctcatcctattttctcatggaggcgtaatgggaagtatttcaacgtggcacgtgatgct
caagcttcaatgcgcagacgctcagggacgctggacatctacgcctggaacaatccagaa
caatatgaggcagagtatcagtgcattgcatccaatgagtatggatctgcttactcccac
aagatcagactacggctatacagagctcctgtgtggccaagggaggttctggagcccgtg
gtggtcagcgctggcttgcctctggtcctgtcctgtgacccgccaccaggcccgccaaaa
cctgaaatctactggatgtccagctgctcgtatgcgagacctttcaactggcccattcag
acagctttccccaccatgcagcctgtgcgtcaggaccgcaggatatccatgggagtaaac
ggagatctgtacttctctaacgtcctgttcaacgattctgctgctgattactgctgtaat
gcccgcttcccctacaagaatgtcatccaacagaagatgcccgtggttgttaaagtgctt
acgactcgtacagtgtccgaggctgcccccacctggctgtctcccacaggctcgtccagc
tccattctcgtcctgcaaggggaagaactgctcctggagtgtatcgctgcagggatgcca
actcctcgcataacctggaccaaggatggtgacgacctcgtggtgacgccgcggatgaaa
gtaaagaacttcagcaagatgattcaaatcccaaaggcatcttttgatgatgtgggtgaa
tacacttgcactgctaccaataatattggatacattgagcacacgataaccgtcagggtc
aaagcggctcctttttggctggagaaacccactaatctggtcttggccccggaggaaaat
ggacgcctggtgtgtcgttctgatggggctcctcgtcccactatcagctggtttatcaac
ggggagccaattgaaactgcaacaccgcagcctaacagacaggtggcaggagacacactg
actctacgcagtgtgactgctgaaaacaccgctgtctaccagtgcaatgcttcaaatcag
tatggctacttaatggccaatgcttttgtcaacgtgctacatgcaacgccacgtatcttt
gggcccagaaatgaactcatcaaggtgacagagggcagtcgttgcttcttagactgtcgc
tactttggttcccccgtgcctgaattgcgatggtccaaatatggacaagggaatctggaa
ggaaatcgttttaagatccacagtaacgggaccctggagatcaaacacatacggatagat
gaccagggaatctacctgtgtgttgtcagcaacattgcaggaagagaagaaagtcaagtc
cgagtagaagtaaaagagcccactttaattgtcacaagaccacagagtatgaaagtcatc
cgtggaagtgatgtgcgctttgagtgtggtgtaaaagcagatgtcactactcctgtcaca
accacctggatgaaagacaaaaaatatgtcactttgggctggagactctctctggatgaa
tcaaatctgattatcactaatgtaaacagaggcgatgagggcaattatacctgtgtcatc
aagagtgaactggaccagaaatctgcctcagcacgcctaatggtgatggaccgtccagat
cctcccactaagttggagttgtcagatccatatgaacgcagtgtaagactcagttgggtc
cctggagacagcaaccacaatcctataacagagtacatagtgcagtatgatgatgatgac
tggttgcctgggaagtggcgaaacctttcaagctacccaggggacctcaactcagtcatt
ctgcaccttacacccttcacctactatgagtttcgggttatcgctgtcaatgcaatcgga
atgagtcgccctagtcgcccatctacgcgcttccagagcagtggtgcacctccagatgtc
atcccaaagaacgtaaagggtgtgggtacatggaggaataacatggaaatcagctgggag
cctctgacctacagagagtggaatgggccccacctgaagtatctggtgtggtggagaaga
agagaatccagagaggagtggaagaatgcaaccactaaatgggcgagatactacatctac
gatgcagataccttcactccatatgacatcaaagtccaggctgtcaacgactttgggctg
ggtccagagtctcctgttatcattggttactctggggaagaccgtcccttaactgcaccc
ctgaacctgagagtgtccgatatcgagagcacccaggtgactttgcactgggactctgta
acacgtggctctatgatgggatcactgaaagaatacaaggcctactactggagggacagc
agccagctcaggtggctgagggtcaacagagggatgaagtccaaatccttcccagacaat
gatccagagccctctggggttctcactgggctcatcccctatagcaactacaagctgtat
ctagtggtggcgaacaatcgatatgaagggccgcccagtaataatatacacttctcaacg
cctgaaggagtaccatctgctccaacatccttcaggatccaacagcgacatctggacagt
atttatgttgactgggacctgccagcagaacccaacggtatcattactggatattccctc
aagtaccaaacagtgaatgccaccaggggtgaggagctgcgggtagaagagttaactcca
aatataacaagtttctcactccggcgatacgaccgctacactcgatacagattctacgtg
gcggcgagaactcggatcgggataggggaatggcatatggaggagtcaccccactacacc
actgaaacgtatgctcaggaccaagtggacatctccactcagggctggttcatcgggatt
atgtgtgctgtggctctgatcgtgctcatcctactcatagtctgtttcatcaaaaggagc
cgaggggggaaatacccagttcgggaaaaaaaagacatttcattggagccagtggatgac
aaagatcaggatggaacatttgactacaggtctcttgaaaggataacccgtgtctccact
ctgccttacccccgacgagacgaggaaagagggcttcaaagaagccagccgtctatggag
gcaatgataaagcgatcagacagtgacgacagtctagtggactatggtgaaggaggcgag
ataccgttcaacgaggacggctcgttcatcggccagtacacaggaaccaggagagatgtc
agggagttggactttggtggaagtctggagctgcactctcccatgaataccatctactcc
ctagcgtaa
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