Etheostoma spectabile (orangethroat darter): 116692367
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Entry
116692367 CDS
T08457
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116692367 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116692367 (exosc10)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
116692367 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
116692367
NCBI-ProteinID:
XP_032376494
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All DBs
Position
7:complement(13145000..13160317)
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AA seq
896 aa
AA seq
DB search
MDTSKNKYSTNSGLQETNSETNDEEKNDLCPGFKDAEAFVKYGLGAVLSATKASTSLPQT
GDEYDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSRMRDRNKLTGLEERFDLVVDS
NDVILERVGILLDEADGVNRNQQPVMPAEFQPPKIVVSSWNRMGSSSGSRSETFRLLQAK
NIARPQMKFKEKVDNSNTPFIPKIFIKPNAVKPLPSYFTNKQIRKERPEDLDVPAALADF
IHQQRTQEHVEDMFAHPYQYELDHLTIPESVTAKPEPQIYKPLTETKCSFIDTLEDLVAL
NEKLCKLSEFAVDLEHHSYRSFLGLTCLIQISSREEDFIIDAIELRSELYILNEAFTDPA
IVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDQLLKHFCNVNSEKRYQ
LADWRIRPLPDEMVQYARMDTHYLLYIYDCVRVQLLDFNHGQPGLLQSVWNKSKDISLKK
YTKPIFTEESYLELQSKQKKSFNTQQLTAFRLLFAWRDKLARQEDESTGFTLPTHMMNKI
SEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIAAEKKKGLTPIKKP
EVTMFGPHDTSRVSEINPQHCSSDDVSVKQGVLFTEDEPKMDVDVQKTSSLMAAAKITQF
EELETQNDHEFLSVAQRKARRIIECFENPFRMYLPSSDVHISKNAKFDPSSKIFEISKRW
KLLSIEQQQKELEAKKEANRKAKEEAKEHTKKVAEERNQAKQSYQESLQNVATVRQQAAE
SAKGGGKKRERVASEVGESTPKPSKKQMKSAEKPQTTEPPPQDSFKPFDYNQSDLKVFAG
TKSKDNTQFDPNRQAHGFKKKKTPRGQKSNSGAGNRSMSYMAGKSERGFRHNWPKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcaaagaataagtactccaccaacagtggccttcaagaaaccaattcagag
accaacgacgaggaaaaaaacgacttgtgtcccggttttaaagacgcggaggcttttgtt
aaatatggattgggtgctgttttatccgccactaaagcatccacaagcttgcctcaaact
ggagatgaatatgatttctatcggagcttcccgggcttccaggagttctgtgaaagtcaa
ggagataagctcttgcactgcatgagtcagataatgcagcaccacggctgcagatctcgc
atgagagaccggaataagctgacgggcctggaggagaggtttgacttggttgtggactca
aacgacgtcatcctcgaaagagtggggattcttctcgatgaagctgatggggtgaacagg
aaccagcagcctgtcatgcctgcagagtttcagccgcccaagatagttgtttccagctgg
aatcgcatgggttcaagctctggcagtcgttctgagacattccgactgctccaagccaag
aatattgctaggcctcagatgaaattcaaggaaaaggttgacaacagcaacacaccattt
attcccaagatcttcatcaagcccaatgcagtaaagcctcttccttcatatttcaccaac
aaacaaatccgtaaagagagacccgaggaccttgatgtcccggctgctctggctgacttc
attcaccagcagagaactcaagaacatgttgaagacatgtttgcacacccataccaatat
gaactggatcatcttacaataccagaaagtgttacagccaagccagaaccgcagatttac
aaaccgttgactgagactaaatgctccttcattgacacactggaagacctggtggccctg
aatgagaagctttgcaaattgtctgaatttgcagtggaccttgagcaccactcctacagg
agtttcctcggcctcacttgtctgatacagatctccagcagagaggaggacttcattatc
gacgccattgagctccgcagcgagttgtacatcctaaacgaggcattcactgacccggct
attgtcaaggtatttcacggcgctgactctgacattgagtggctccagagggactttggc
ttgtatgtcgtcaacctgttcgacacgcatcaggccagccgagctctgaacctggccaga
cattccctcgaccaactgctcaaacacttctgcaatgtgaactcagagaaacgctaccag
ctggctgactggaggattcgccccttgccagatgagatggtgcagtatgcccggatggac
acccactacctcctatacatctatgactgtgtgagggtgcagctgctggatttcaaccac
gggcagccgggcctgctgcagagtgtctggaacaagagcaaagacatttctctgaagaaa
tacacaaagcctatattcacagaggagtcatatttggagctgcagagtaagcagaaaaag
tctttcaacacccagcagctcactgccttcagactgctgtttgcctggagggacaagctg
gccaggcaggaagatgaaagcacaggattcaccctgcccactcacatgatgaacaagata
tctgaggagctgcccaaagagcctcaaggcatcattgcctgctgtaaccctgtaccccca
ctggtcaggcagcaggtcaatgagctccatttgttagtgcagcaagccagagaaatgcct
ctccttaaggctgagattgcagctgagaagaagaaaggactcacgcccataaaaaagcca
gaggtcacaatgtttggtcctcatgatacatccagggtctctgagatcaatccccagcac
tgttcttctgatgatgtgtctgtcaaacaaggggtgctcttcacagaggatgaacccaag
atggatgttgatgtgcagaaaacaagtagtctcatggcagcagctaaaattacacagttt
gaggagctggaaacacagaatgaccacgagttcctctctgtggctcagaggaaagccaga
cgtatcattgagtgttttgaaaatcctttcagaatgtacttaccctccagtgacgtgcac
atcagcaagaatgccaagtttgacccttcttcaaaaatatttgagattagtaaaagatgg
aaactcctgagtattgaacagcaacagaaggagttggaggccaagaaggaggccaatagg
aaagccaaggaagaagcaaaggaacacacaaagaaagtggcagaggaaagaaaccaggct
aaacagagctaccaggagtctctccagaacgttgccactgttcgccagcaggcagcggaa
tctgcaaaaggtggcggaaagaaaagagagagggtggccagtgaggttggagagtcgact
cccaaaccaagtaagaagcagatgaaatctgcagagaagccccaaacaacagaaccgcca
ccccaagacagcttcaagccttttgactacaatcagtcagacctcaaagtctttgctggt
acaaaatctaaagacaacacccagttcgatccaaaccgacaagcccatggttttaagaaa
aagaaaactcccaggggacaaaaatccaatagtggagctggaaaccgaagtatgtcgtac
atggctggaaaatctgagagaggattccggcacaactggcccaaaagataa
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