Etheostoma spectabile (orangethroat darter): 116692380
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Entry
116692380 CDS
T08457
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116692380 (rprd1b)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116692380 (rprd1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
DUF5076
Motif
Other DBs
NCBI-GeneID:
116692380
NCBI-ProteinID:
XP_032376531
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All DBs
Position
7:15058905..15066604
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AA seq
329 aa
AA seq
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MSSFSESALEKKLTELSSSQQSVQTLSLWIIHHRKHSGLIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFTKDFETVLVDACSHVARYEADEGCKKHMERLLNIWKERALYRG
DFIQQLKLAIDDSNSPRPSEEKKAVKRSYQKIQEEEDDEDDDYRNHVSPHNSDISATQLT
EELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKISDKEAADKLSETVDEACLLL
AEYNGRLAAELEDRRQLARMLTEYINSQKEALMEREKKLEEYKQKLARVTQVRKELKSHI
QSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttctccgagtcggccctggagaagaagctgacggagctgagcagctcgcag
cagagcgtccagactctgtctctgtggatcatccaccaccgcaaacactcgggcctcatc
gtcaaagtgtggcacagagagctgaaaaaagctaaaagctccaggaagctgaccttcctg
tatctggccaacgatgtcatccagaacagcaagaagaaaggacccgagtttaccaaagac
tttgagacggtcctcgtcgatgcctgctcccatgttgccaggtatgaagccgatgagggc
tgtaaaaagcacatggagagactgctgaacatctggaaagagagagccctctacagagga
gacttcattcagcagctcaaactagccatagacgactctaacagtcccaggccttcagaa
gagaagaaggctgtgaaacgcagctatcagaaaatccaggaagaggaggatgatgaagat
gacgactacaggaaccacgtctcccctcacaactcggacatctctgcaactcaactgaca
gaggagctggtgaaggccctacaggacttggagaatgctgcatcaggcgacgcagcagtt
cgtcagaagattgcctcgctgccgcaggaagtccaggacgtttccctgctggagaaaatc
agtgacaaggaagcggcagacaagctgtcagagacggtggatgaagcgtgtttgctgctt
gctgagtacaacggccgactggctgcagagctagaggatcgcaggcagcttgcccgcatg
ctgactgaatacatcaacagccagaaggaggcgctcatggagagagagaagaaactagag
gaatataagcagaaactggcgagggtgacccaagttaggaaagagctaaagtcccacatc
cagagtctccctgacctctctctcctacccaacgtgaccgggggtctggccccgctcccg
tcagccggagacctcttctctaccgactga
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