Etheostoma spectabile (orangethroat darter): 116692396
Help
Entry
116692396 CDS
T08457
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp00310
Lysine degradation
esp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116692396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116692396
03036 Chromosome and associated proteins [BR:
esp03036
]
116692396
Enzymes [BR:
esp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
116692396
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116692396
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116692396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2H2_11
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
116692396
NCBI-ProteinID:
XP_032376554
LinkDB
All DBs
Position
7:14071591..14080075
Genome browser
AA seq
1392 aa
AA seq
DB search
MEDSPHLYISEFGDIEDMEEEEEEDYIYQEETNMESDMIKSLYPDLHKHPNQDTERDWNC
FPCQHCERHFTSKQGLEQHMHIHALANNETHAYKTNKSNTFFGSNLGQLQHEKMMPLDSV
GSVRQLHTSSPTSSNTCILSAGDHTAQPDKLGVLEGHHACKYCEKIFTTHTNKQQHEHRI
HEQHLQVTDVEKTQLPQEENLQRILSEKSPQETELGDNTAPAAVVDNIVKHAEQYMLDVS
SNISENLSFYIDGKIVSTSTVSSCEAAEINSGSGSVGLDALILDPTQISQVLNTDSVTGK
EIPGQTLARRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLHPQNTESTVVQKER
TVFVSPKLKQLLEKQDGLKPTLALLADGQKPCSPVSLSPLPAGSGRFKRRTGSPPSSPQQ
NPTSKEETPDTGCCDAASTGQMDTQYGSPLHQTANVKDDTTPPVETEPTPILTESWSPAT
GGNSCNQQPLDLSNTVNSSVDVAVADAVLDLSLQKKTLGDSEPTLNLVPQAILKEGKSCM
VETALMNNEEQNVSLGNLETPLVTDFTIFTGPDMMTQLEPMAEGLVYGLALPSDPLTPSP
ASLAPVALQPASPCTIAFASPVSRRTLPTAPSLITVLAPPHISNPSSQPIQVLAPNISSE
PLVICTENALHFSECDLTSAFATTSSANPVTLSQSFDPNLNLPGHVFLSDPLALHPPIVE
STPMSEVPFTPTVTLTDSLINSYNIASNTVLIECTIALEAPGSIVPAAVTLQENTAEPPA
PTQMVVNHIEQQQIVSMPNPQTVDPTILMSSISESVTLSTTASVISDCPTMAESSPDPEP
AVNTESPTIKEEEPADSSVSIPKISSKTSPSSEKAVEDESFNNIPSDAQQQTFTKNFICN
VCDNLFHSMKELGYHVGDHADEWPFKCEFCVLLFNKPSALLDHRLNLHGVGKTYVCSTCT
KEFVYLCNLKQHQEELHPGQQCTYTEDEKGKLRPQNYNNLTKVNTKPSVPDAAEEPKIVG
GEVDVAAEELFTTIKMMASDGAKVKGPDVRLGINQHYPSFKPPPFPYHNRSPAGSVASAT
NFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKRNPIPLRHFAK
IQNGVLSTTNSTHGLNASNRPSQSNRSKPNQESQVNVKFKVLNKKKKKLVQRVMPQRNKP
VPSSNKMSPAQVDVQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEVKKRKEGGISVTK
ENNRHLHRGVEEKQQASPKHKTRLQTSGPGKRSAILPVQTVFSNKRSKIIIKESTQPKQE
TPSLNELPIVRTFNPSMRQYSRVQHNVKGIPIKITIVKPQQAAPQKDELPPTQSREEATG
AVTNSNEQSPTA
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgcctcacttgtacatctctgaatttggagacattgaggacatggaggaa
gaggaagaggaggactacatttatcaagaggaaactaacatggaatcagacatgattaag
tcactgtacccagatctccataaacatccaaaccaggatactgagagagattggaactgt
tttccctgccagcactgtgagagacattttaccagcaaacaaggcttagaacaacacatg
cacatccacgctttggcgaacaatgagacacatgcgtacaaaaccaataagagcaacact
ttttttggttcaaatctgggtcagctgcagcatgagaagatgatgcctctggattcagta
ggatcagtcaggcagcttcatacttcatcccccactagttctaatacttgcattttgtcg
gctggtgaccacactgctcagccagacaaactgggagtattagagggacatcatgcttgc
aagtactgtgaaaagatattcactacacataccaacaagcaacaacatgagcacaggatc
cacgagcagcacctgcaagtcactgatgtggaaaaaacccagctgccccaagaggaaaat
ctccagaggatactcagtgaaaaatctccacaagaaacagagcttggtgacaatacagca
cctgcagctgttgtggacaatatagtgaaacatgcagagcaatacatgctagatgtctcc
agcaatatttcagagaatctgagcttttatattgatggaaagatagtgtcaacaagtaca
gtcagtagctgtgaagcagctgagattaattctgggtctggatctgttggactggatgcc
ctgattttagaccccactcaaatcagccaggttttaaatactgattcagtaacaggcaaa
gagatacctggtcaaacactggccaggagaagaactgcaacaccacctcttttaccacaa
attaaaactgaactggagtctgaggtggttgtgtcatcttcctcctcttcacttgtatct
tctttgatagagaatctacatcctcagaatacagagtctacagttgtgcagaaggagaga
actgtgtttgtgtctccaaagctgaagcagctcctggaaaagcaggatggtcttaaacct
acacttgccctcctcgcagatggccagaagccttgttcacctgtctctctctctcccctg
cctgctggatcaggaaggtttaaaagaaggaccggatctccaccaagctctccccagcaa
aacccaacttccaaagaagaaacaccagacactggatgttgtgatgctgcaagtacaggg
cagatggacacccaatatggttcacctttgcaccaaacagccaatgtaaaggatgacaca
actccacctgtggagacagaaccgacacctatcttgacagagagctggtcccctgcgacc
ggcggtaactcctgtaaccagcagccactggatctctctaatacagtcaacagcagtgtg
gatgtagctgtagctgatgctgtgctagatttgagtttgcaaaaaaagaccctgggtgat
tctgaaccgacattaaatttagttccacaggcaattttgaaagaaggaaaatcatgtatg
gtggagacagccttgatgaataatgaagagcaaaatgtaagcctagggaatcttgagacc
cctttagtcacagacttcaccatatttacaggtccagatatgatgacccaattggagcct
atggcagaaggacttgtttatggacttgcacttccttctgatcctctgactccatcacct
gcctccctagcccctgttgctttgcagccagcttcaccatgcactatagcatttgcttcc
ccagtctcacgcagaacactcccaactgctccttcattaatcacagttttggcaccacca
catatttctaatccttcaagccaaccaatccaggtattggccccaaatatatcttcggag
cccctggtaatttgcaccgaaaatgcattacatttttcagagtgtgatttaacttctgca
tttgccaccacgagttctgccaaccctgttactctctcccagtcctttgatccaaatcta
aatctacctggccatgtgtttctctcggatccactagctcttcatccgcctatagttgag
tccactcctatgtcagaagtgccattcacacccactgtaactttaactgattcactcatc
aactcttacaacattgccagcaacacagtgttgatagagtgcacaatagctcttgaagcc
ccagggagtatagtccctgctgcagttaccttacaagaaaacaccgcagagcctccagca
cctacacagatggttgttaatcacatagaacagcaacagattgtctcaatgcccaatcct
caaactgtggaccccactattcttatgtcctccatctcagaatcagtaactctatccacc
accgcctcagtgatatcggattgtcctactatggctgaatcaagtcctgacccagagcct
gctgttaatacagagtcaccaaccataaaagaggaggaacctgctgatagtagtgtttcc
atacccaaaatttcatctaagacctcaccttcttctgagaaagctgtagaggacgaatca
ttcaacaacataccaagtgatgcacaacagcagacttttaccaagaattttatctgcaat
gtgtgtgataatcttttccattcaatgaaagaacttggctatcatgtaggtgaccatgct
gatgaatggcccttcaaatgtgagttctgcgtgctgctcttcaacaaaccctctgctttg
cttgatcatcgattaaacctccacggcgtcggcaagacttatgtttgcagcacatgtaca
aaagaatttgtctacctttgtaatctgaaacagcatcaagaagaattgcatcctggccag
cagtgtacgtacacagaagacgaaaagggaaaactaagacctcagaactacaataactta
acaaaagtcaacacaaagccctcggtgcccgatgccgcagaggaacccaagatagtggga
ggtgaagtagatgtggcagctgaagaactgtttacaacaataaaaatgatggcctcagac
ggagccaaagtcaaagggcctgatgttcgtcttggcattaaccaacattatcccagcttt
aagccccctccatttccttaccataacagatcacctgctggctcagtggcttcagccaca
aacttcaccacccacaacatcccacaaacctttagtacggctattaggtgcactaagtgt
ggaaagagctttgataacatgccagagttacacaagcatatcctagcttgtgcaaatgcc
agtgataaaaggcgatacacgcccaaaaggaatcctatcccactacggcactttgcaaaa
attcaaaatggagttctgtctaccaccaattctactcacggacttaatgcttcgaatagg
cccagtcagtcaaacaggtccaaacctaaccaagaatcacaggtgaatgtgaagttcaag
gtgttgaacaaaaaaaagaaaaagttggtccaaagagtcatgccacagaggaacaagcca
gtcccttcatcaaataaaatgtcacctgcacaggtggatgtgcagcaggagatctttgtc
tgcccacactgtagcagggagttcacaatgcgccgcagcagaaccaaacacatggcggtc
tgccccaagaaaccgaaagaggtgaagaaaaggaaagaaggaggaatctctgtgacaaag
gaaaataatagacacctgcatagaggggttgaagagaaacaacaagcctcgcctaagcat
aaaacaagactccagacttctggccctggtaaaaggtccgccatcctaccggtgcaaacg
gtcttttcaaacaaaagaagtaaaataattataaaagagagcacgcagccaaaacaagag
acacccagtctgaatgaacttcccattgttcgcactttcaacccctctatgcgccagtac
agcagagtccagcataacgtcaaaggaatccccattaaaatcaccatagtgaaaccacag
caggctgcaccacagaaggatgagctgcctcctacccagagccgagaggaggcaaccgga
gccgtcaccaacagcaatgagcagagtcctacagcctga
DBGET
integrated database retrieval system
