Etheostoma spectabile (orangethroat darter): 116692542
Help
Entry
116692542 CDS
T08457
Symbol
l1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116692542 (l1cam)
04517 IgSF CAM signaling
116692542 (l1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116692542 (l1cam)
04090 CD molecules [BR:
esp04090
]
116692542 (l1cam)
04091 Lectins [BR:
esp04091
]
116692542 (l1cam)
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
L1 family
116692542 (l1cam)
CD molecules [BR:
esp04090
]
Proteins
116692542 (l1cam)
Lectins [BR:
esp04091
]
I-type lectins (Siglecs)
116692542 (l1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
C2-set_3
Pur_ac_phosph_N
Ig_5
Ig_PDGFR_d4
Ig_C17orf99
V-set_CD47
Fn3_VIN3
SusE
Ig_J
Motif
Other DBs
NCBI-GeneID:
116692542
NCBI-ProteinID:
XP_032376806
LinkDB
All DBs
Position
7:complement(10598735..10639386)
Genome browser
AA seq
1277 aa
AA seq
DB search
MPHTQRQQVCSRGQCSSLLLRLLLLLSLAAQPSQAAIHIPSNYHISDLKRPPMIITHPES
VTVFSVEDLVMSCEASGNPLPIFRWTKDGEEFDPGSDPELKVSERPGSFAFYTLSNTMDN
LKQYQAKYVCYASNELGTAVSNEATLTTDVPPSQQKEKKVNVKSEEGNSIVLKCNPPQSS
MEPIIHWMDWRLHHIQLSERVVVGKDGNLYFAHLTTEDNRNDYTCNVQYLATRTILAKEP
ITLTVNPSNSVLRNRRPHMMRPTGSHSTYHTLRGQTVELECIAQGLPTPQVLWLRKDGEM
SESRTIKEMFNRRLRISNISESDGGEYQCIAENSQGKATHTYTVAVEAAPYWIKEPLSQL
YAPGETVRLDCLADGIPSPTISWTINGIPLSETDKDSRRSLTASGSLILKDVNFGDTAIY
QCQASNKHGTILINTNVYVIELPPQILTEDGNTYIVPEGKKALLECETFGSPKPKVIWES
SSTSSLLADPRMNPLTNGVLEIFNVTHDDSGFYTCSVQNTNLSVSVELEVLNRTVILSPP
QDLKVQRGNTTIFTCLALVDPKLGSPQIQWRKNDKKIFDSHSNEKYTVDGPELKITNVEE
DDEAVYTCQVITKLDMAEASGTLTIWDSPDPPVHLQITNPKHRAVTLSWTPGDDHNSPVQ
EYVVEFEDQGSKERGWEELKRVMGNKERVSLSLWPYMSYRFRVIAINYVGKSNPSRPSEI
HNTPAEAPDNNPEDVRSVSEDPDTLVITWEEMDKRNFNGPDFKYRVFWRRVVGSGPNWHT
NYTTTSPFTVNDIGNFSAFEIKVQAVNGKGDGPEPDPVIGYSGENVPLEAPMNVGVELMN
STTITVNWAAVDKETVRGHLLGYKVYLTRSSSMGHHRGWRPREPESTVVVETGPTEDKKV
ISDLRPYSHYALVVTVFNSKGEGPPSETDSFRTPEGVPGPPMSLMLDSPSETEMTLHWTP
PGHPNGVLIGYLLQYQQIVESDDNPMQVSKIDDPTLTHITLKGLDHHSHYRFFLRGYTAA
GDGEPIVREGATTLDGVPPADIHLSVGENFVNLSWVAKKRHRNVSFQVHYLNKNDGSKWK
KTEKVNTSQSFYQLQGLTPGSHYRLLFTYSNTTFLETEIKTEGTGVTEVQPSFATQGWFI
GVVSAIVLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLE
EKRTASLPSLGEESKLCSEDNLDFNGSSAITTELNMDESLVSQFSRPSVGPEALHGLPDN
SLLNPTNGMPNSVTILD
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggtttgcagtagggggcagtgctcctctctcctactc
cgcctcctcctcctcctctcccttgcggcccagcccagccaagcagccatacacataccc
tccaactaccacataagtgatctcaagaggcctccaatgatcatcacacatccggagtct
gtcaccgtctttagtgttgaagacctcgtcatgagttgtgaagcctccggcaaccctctc
cccattttccgatggacaaaggatggagaggagtttgacccaggcagtgacccagagctg
aaggtttctgagcgccctggttcatttgcattctacacactcagtaatactatggacaac
ctgaagcagtaccaagccaaatatgtctgctatgcatccaatgagctggggacagccgtc
tctaacgaggccacactcacgactgatgttcccccatcccagcagaaagaaaaaaaggtg
aatgtgaagtctgaagagggaaacagtatcgttctgaagtgtaaccccccgcagagctct
atggagcctatcattcactggatggactggaggctacaccatatccagctgagtgaacgg
gtggtggtggggaaggatggcaacctatactttgcccatctgacaactgaagataacagg
aatgactacacctgcaatgtccaatacctggcaacacgcaccattctggcaaaggaaccc
atcactctgactgtaaacccctccaactctgtgctgcggaacaggaggccccacatgatg
agacctactggaagccacagcacttaccatactctcaggggccagactgtggagcttgag
tgcattgcccaaggccttccaactccccaagttttgtggctgaggaaggatggcgagatg
tctgaatctcggaccattaaagaaatgtttaaccgccgcctgcgaatcagtaatatctca
gagagtgacgggggcgagtaccagtgtatagccgagaactcccaagggaaggccacacac
acttacactgtggctgtggaagcggctccatactggatcaaggagccactaagtcagtta
tatgccccaggtgagactgtcaggctagactgccttgcagacggcatcccctctcctacc
atcagctggacaatcaatgggatccccctctcagaaaccgacaaggactccagacgttct
ctgacagcaagcggatctctaatcctaaaggatgtcaactttggagacactgccatctac
cagtgccaggcctccaacaagcatggaaccattctcattaacaccaatgtctacgtcatt
gagctgcctccccagatccttactgaggatgggaatacatacatagttccagagggcaag
aaggctttactggagtgtgagacctttggctctcctaaacctaaagtcatatgggagagc
agcagcacctcctcccttctggcagatcccagaatgaacccgctcaccaacggagtgctc
gagatctttaatgtcacccacgatgattcgggcttctacacctgctctgtacagaacacc
aacttgtctgtcagtgtcgaactagaagtgctcaacagaacagtgatcctgtcaccaccc
caggatctgaaggtgcagcgtggaaacacaacaatcttcacttgcctggcccttgttgac
cctaaacttggctctccacaaattcagtggagaaaaaacgataaaaagatatttgactcc
cacagtaatgaaaaatacacagttgatggaccagagctgaaaataactaatgtggaagaa
gatgatgaggctgtgtacacatgtcaggtcatcactaagcttgacatggctgaagccagt
ggcactctcactatatgggatagtccagaccctcctgtccatctccagatcactaaccct
aagcatcgtgcagtcaccctcagctggactcctggagatgaccacaacagccctgtgcaa
gagtatgtggttgagtttgaggaccaaggttcgaaggagagaggttgggaagagctgaag
agagtaatgggaaacaaggagcgtgttagcctatctctgtggccctatatgtcctaccgt
ttccgggtcattgccatcaattatgtaggaaagagcaaccctagcaggccatctgaaatc
cacaacacacctgctgaagctccagacaataacccagaagatgttaggagtgtatccgaa
gacccagacactctggtcatcacctgggaggaaatggataaacgtaacttcaatggacct
gacttcaagtatcgggtgttctggaggcgagtggtgggcagtgggcccaactggcacacc
aactacacaaccacatcaccattcacagtcaatgacattggcaacttttctgcatttgag
atcaaagttcaggctgtcaatgggaaaggggacggacctgagccagacccagtcattggc
tactcaggagaaaatgttccattggaggccccaatgaatgtcggtgttgaacttatgaac
agcactaccatcacagtgaactgggcagcagtagacaaagagacggtcagaggacacctg
ctgggatacaaggtgtacttgaccagaagcagctccatgggccaccaccgaggctggagg
cccagggagccagagagcactgtggtggtggagactgggcccaccgaggacaagaaagtg
atcagcgatctcagaccatactcccactacgccctggttgtaactgtattcaacagcaag
ggagagggacccccttctgagactgattccttcaggactcctgagggagttcctggtcct
cccatgtccctgatgctggacagcccatcagagacagaaatgaccctccactggacacct
cctggccaccccaatggagtccttattggatatctactgcagtaccaacagattgtggag
agtgatgacaacccaatgcaggtttcgaaaatagacgaccccacactcacacacattacc
ctgaaaggcctggaccaccacagccactatcgcttcttcctgaggggatacactgctgca
ggggacggagagcccatcgtgagggagggtgccaccacactggatggagtgcctcctgcc
gacatccacctgtctgttggggaaaactttgtcaacctcagctgggtggccaagaagaga
cacaggaatgttagcttccaggtccactacctcaacaaaaatgatggcagtaaatggaag
aaaacagagaaggtgaacacctctcagtctttctaccagctccagggcctgactcctggc
tctcattatcgtctactcttcacctacagcaacaccactttcttggagactgaaatcaag
acagaaggaacaggagtgacggaggtgcagccaagctttgcaacgcagggctggttcatt
ggtgttgtgagtgccattgtgctgctgctactaatactgctcatcctctgtttcatcaaa
aggagtaaaggggggaagtattcagtgaaagataaagaagagggtccaatggactcagaa
gcacggcccatgaaggatgagacttttggagagtacagatctctagaaagtgacctcgag
gagaagcgcacggccagcctgccgtccctgggcgaggagagcaagctgtgcagcgaggac
aacctggacttcaacggcagtagtgccataaccactgagctcaacatggatgagtctctg
gtcagccagttcagtcggcccagcgtgggtccagaggcactgcatggcctgccagacaac
tccctgctcaaccccaccaatggcatgcccaactcagtcaccatcctcgattaa
DBGET
integrated database retrieval system
