Etheostoma spectabile (orangethroat darter): 116692564
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Entry
116692564 CDS
T08457
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116692564 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esp03400
]
116692564 (xpc)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116692564 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
116692564
NCBI-ProteinID:
XP_032376850
LinkDB
All DBs
Position
7:complement(16325189..16337635)
Genome browser
AA seq
933 aa
AA seq
DB search
MAKQRECAETEACTKKLKQVLKAKSSGAKARTKKKDAANGHTEEEERLERKVKPKPRRYT
KRASGNATSNTSTTAIAVKTSKYFQSPVKEEETESEDDFHKVNAAAPAVTVNAKKTEKED
EEEEEDSEEDEDDWEEVEELSGPLGPVEPPEPVLPSQPVEIEIETPEIRKKRKRQAEFEM
YLRRMMNRYKKDVLIDTHKVHLMCLIASGMFRSRLCSEPDLLAITLSLLPPHFSMVAKQR
IDQNYLSGLLKWFRATFTLNPSLPCEERPDPRALLERRLASLSFRNHQEMTHLFLLVLRS
LQLFCRLVLSLQPIPFKSPSAKGKGARTSTGAPGKSNTSQQTSKTASPEPKVSTGTKRPA
GGEKINGDGGGKKAKTKDIKEETAKEKEKVITSGGQRPKNSKRRSIASKVSYKEESDSEA
EKEEEVLSDEEDFQATSEEDSEDPEGGAKSIKRKKGKSKAKLTNNKNTAAPKKRSGGGKK
QVEEWEEDDDDDDEEEEGTTSNRTKRKSGKKDGPGADEWLEVYLEKTASWVCVDVEHGVE
MPHLCSQNATAPVTYVVSVDGDGFLKDLGRKYDPTWLTLSRKRRVDEDWWEETLEPFLGP
EDERDRKEDKELQNKLLNKPLPISIVEYKNHPLYALKRHLLKYEAIYPSTATVLGYCRGE
LVYSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVKGFSNRSRKARMATEQKDANDLALFG
KWQTEEYQPPIAVDGKVPRNDYGNVYLFRPCMLPVGCVHLKLPNLHRVARKLNIDAAPAV
TGFDFHGGYSHAVTDGYIVCEEHEEILRAAWGEEQQIQKQKEKEKKEKRVISNWTLLVKG
LLIRERLKQRYGKKNQGLGGLADAEETGGLSADEEVVEGGSPLAMTASETVAMSWPQNRQ
AEEEGGSISGLKKKTTKREKRGQEKHLFPFEKV
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagagagagtgtgcagagacggaggcctgtacaaagaaactgaagcaggtg
ttgaaggcaaagagcagcggagcaaaagcgagaacgaagaagaaagatgcagctaatggc
cacacagaggaagaggagaggcttgagaggaaggtcaaacccaaaccacggcgctacaca
aaacgagcatcagggaacgccacatccaacacatccacaactgccattgccgtcaaaacc
agtaaatacttccagtcgccagtgaaggaggaggagactgagagtgaagatgactttcac
aaggtaaacgcagcagcccctgcagttacggttaatgccaagaaaacagagaaagaagac
gaagaggaggaggaggacagtgaggaagacgaggatgattgggaggaagtggaagagctt
tctgggccactgggtccagttgaaccaccagaacctgtcctgccctctcagccggttgag
atagagattgagactccagaaatcaggaaaaagcgaaagaggcaggcagagtttgaaatg
tatctgaggcggatgatgaaccgatacaagaaagacgtgctgatagacacacacaaggtt
cacctgatgtgcctgatagccagtgggatgttccgcagccgcctgtgcagtgaaccagac
ctgctggccatcactctgtcgctgctgcccccccacttcagcatggtcgccaagcaacgt
atcgaccaaaactacctctctggactgcttaaatggtttagagcaacgttcaccctcaac
cccagtcttccctgtgaggagcgtccggacccacgggctctgctggagaggcgactagcc
agcttgtcattcagaaaccaccaggagatgactcatctgttcctgttggtcctgaggtct
ctgcagctcttttgccgattggttctttctttgcagccgattcctttcaaatccccatca
gccaagggcaaaggggctagaacatctaccggtgccccaggaaaaagcaacacaagccag
caaacttccaagaccgcctcccctgagccaaaggtgtctactggcaccaagagaccagct
ggaggggagaagatcaatggagacggaggaggaaagaaagcaaagacaaaagacataaaa
gaggagactgcgaaggaaaaggagaaggttataacatcaggagggcaaaggccaaagaac
tcaaaacgccgcagcatcgcctcaaaagtcagctacaaggaagaaagtgacagtgaagca
gaaaaagaggaggaggtgcttagtgatgaggaggattttcaggcgaccagtgaggaagac
agtgaggatccagagggaggggctaaatccattaagaggaaaaaggggaagagcaaagcc
aaattgaccaacaacaagaatactgcagctccgaaaaaaaggagtggtggagggaaaaaa
caagtagaagagtgggaggaagatgatgatgatgatgatgaagaagaagaaggaacaaca
agcaacagaacaaagcgaaagagtggaaaaaaggacgggcctggagcggacgagtggttg
gaggtgtatctggagaaaactgcctcctgggtttgtgtagatgtggaacatggtgtcgag
atgcctcacctctgctcccagaatgcaacagcacctgtgacgtacgtggtgtcggtggat
ggggacggctttctgaaggacctggggaggaagtacgaccccacctggttgacattgtcc
aggaagagacgggtggatgaagattggtgggaggaaacgcttgagccatttctgggacct
gaggacgagagggacagaaaggaggacaaggagctccagaacaagctgctgaacaaaccc
ctgccgatctcaatagtggagtataagaaccacccgctgtatgccttaaagagacacctt
ctgaaatatgaagctatctacccttcaacagccactgtactgggatactgcagaggggag
ctggtgtactccagggattgtgtgcacacgctccactccagagacacttggctcaaagag
gcgcggactgtcaggctaggagaggagccatataagatggtgaagggtttctctaatcgt
tcgcgtaaagccaggatggctactgagcagaaggatgcgaatgacctggctctgtttgga
aaatggcagactgaagagtaccagccgcctatagctgtggatgggaaggttccccgtaac
gactacggtaacgtctacctgtttaggccctgtatgttaccggtgggctgtgttcacctc
aagctgcccaacctgcaccgcgtggcaaggaagctgaacattgacgcagcccctgcagtc
acgggcttcgacttccatggaggatactctcatgctgtgactgatggttacattgtgtgt
gaggagcatgaggagattctcagagcggcctggggggaagaacaacagattcagaaacag
aaggagaaagagaaaaaagaaaagagggtgatctccaactggactttgctggttaagggg
ctcctgatcagagaaagacttaaacagcgatatggaaagaagaaccagggcctggggggc
ctcgctgacgcagaggagactggcggactttcggcagatgaggaagtggttgagggcgga
agtccattagctatgacagcgtctgagactgtggccatgtcctggccccagaacagacaa
gcagaggaggaaggagggagcatcagcggactgaagaagaagacaacaaaacgagagaag
agaggacaagagaaacatttgttcccctttgagaaagtgtga
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