Etheostoma spectabile (orangethroat darter): 116692583
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Entry
116692583 CDS
T08457
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116692583 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116692583 (mbd4)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116692583 (mbd4)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
116692583 (mbd4)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116692583 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
116692583
NCBI-ProteinID:
XP_032376892
LinkDB
All DBs
Position
7:complement(5510428..5514577)
Genome browser
AA seq
460 aa
AA seq
DB search
MHTSCEIHQSHKDIDDSCLTSTLPLGWIREVRQRKEGKTAGKMDIYITSPQGQKFRSRAS
LHAFLLKDGEGNLDINLFDFTASKDNVVTTSQLLPSQVKQRRRKKRNANGQQMTTEDATP
NKSERAPSSLRSETKDSKVKSATVKCEAAPTTTEDDVKLQRSPQMAGQSLREKLLRLAPS
SNQQNTLIVHKDEEADLQPSVPTLNVEPATEIKNEGEDERDGGEIQSHSKGDNKSNSELG
VVAGSHRDEGGELLPDIAGGSCTPVRYSQNDDLHGLTPYKSSSSMSKSMEDKRKTSPYFS
RKPTREGLSPPRRKAFKKWTPPRSPYNLVQETLFHDPWKLLVATIFLNKTSGKMAIPVLW
QFFERYPSAEVTREADWKPLSELMKPLGLYELRAKTLTRFSDEYLSKQWRYPIELHGIGK
YGNDSYRIFCVGEWRDVKPEDHMLNKYHAWLWENHETFGI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcatactagctgtgaaatccaccaaagtcacaaggacatagatgactcatgcctcacc
tccacattgccccttggctggatcagagaagttaggcagcggaaagaagggaagacagca
ggcaaaatggatatctacattacaagtccccaagggcagaagttccgctcaagagcatcc
ctgcatgctttcctcctaaaagatggagaagggaacttagatataaacctctttgatttc
accgcatctaaggacaatgttgtcaccacttcacaattactcccctctcaagtaaaacag
aggagaagaaagaaaaggaatgcaaacggacagcagatgacaacagaagatgcaacacca
aataaatctgaaagagccccttcctccctcagaagtgaaactaaagacagcaaagtaaag
agtgcaactgtgaagtgtgaagctgcacctacaaccacagaggatgatgtcaaactgcag
aggagccctcagatggcgggtcagagtttgagagagaagctactcagactggctccttcc
agtaaccaacaaaacactctcattgttcacaaggacgaagaggcagacttgcagccttct
gtcccgactctgaatgtggagcctgccactgagataaagaacgagggtgaggatgaacga
gacggaggtgagatacagagtcacagcaaaggtgacaacaagtctaattcggaactgggg
gtggtcgctggaagtcaccgagatgagggaggcgagctgttacctgacatcgctggtggg
agctgcacaccagtgagatattcccagaatgatgatctacacggtctgacaccttataaa
agtagcagttcaatgtccaagagtatggaagacaagcgaaaaacaagcccttatttcagc
aggaaacctaccagagagggccttagcccacccagaaggaaggccttcaagaagtggaca
ccccctcgctcaccctacaacctcgtacaggaaacccttttccacgacccttggaagctc
ctggtggccaccatttttctgaataagaccagtggcaagatggccataccagtactgtgg
cagttctttgaacgttacccgtctgcagaggtgacccgtgaggccgactggaagccccta
tccgaacttatgaagccactaggcctttatgagcttagagccaaaacactcactcgattc
tcagatgaatatctatctaaacagtggcgttaccccatcgagctgcacggtattgggaag
tacggcaacgactcctataggatcttctgtgtgggcgagtggagagatgtgaaacctgaa
gatcacatgttaaacaaataccacgcctggctgtgggagaaccatgaaacatttggaatc
tga
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