Etheostoma spectabile (orangethroat darter): 116692646
Help
Entry
116692646 CDS
T08457
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1-like
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116692646
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116692646
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116692646
Nuclear receptors [BR:
esp03310
]
1. Thyroid hormone like
1D. Rev-Erb
116692646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Acetyltransf_11
Thioredoxin_13
Motif
Other DBs
NCBI-GeneID:
116692646
NCBI-ProteinID:
XP_032376996
LinkDB
All DBs
Position
7:9891200..9902012
Genome browser
AA seq
574 aa
AA seq
DB search
MDNSPGGGVILYAGSSGSSSPSPGSPGSPSSGYQTQSPSSHSQPSSPEEGAFTEIGALKC
RTAGCKTSSSKLIFQFPEVYSAPPAAATPQHTYAHPIGGKRPCGFTGTFTKTGGMVLLCK
VCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFKKC
LSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNESATVDVDPPSAKDTPSTPEDGNSK
EAIGAISRAYRDIFTSSNSRGRAAERANITNNNMSHVFQDASFTQVSSLTTSTQSYQSCP
VVAATLCSATLDDKQPTFHNLDNNRYTYLVSTNQNHDQSNSTSQRGSSANNNSFPNAGST
QNQSSCPWKLASGAKLLACPLNAWPVSGAERTSQEIWESFSQCFTPAVKEVVEFAKGIPG
FQELSQQDQVMLLKSGTFQVLMVRFCTLFNAKERTVTFLNGQTYPLSTLQALGMGSLLDA
MFEFSEKLSSLGLEPDEMALFMAVVLVSADGSGISNMRAVEQLQEGLIRALRSLITRRRP
DDSTLFPKLLLRLPDLRTLNNMHSDKLLAFRIDP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggataacagccctggtggtggagtcatcctgtatgcaggatcctctggcagctccagt
cccagccccggcagccctggcagcccctccagtgggtaccagacacagtcaccttcttca
cactcccagccctcatcaccagaggagggggccttcacagagattggggcgttgaaatgt
aggacagctggatgcaagacatcatcctccaaactgatattccagttcccagaggtctac
agtgcacccccagcggcagccactccacagcatacctatgcacaccctattggaggaaag
aggccatgcgggttcacaggaactttcacaaagacaggtgggatggtcctgctctgcaaa
gtctgtggggacattgcatctggattccactatggagtgcatgcatgcgagggttgcaag
ggtttttttcgccgcagcattcagcagaacatcaactacaagatgtgtgtgaagaatgag
aactgtctaatcatgcgcatgaaccgcaaccggtgccagcactgccgcttcaagaaatgc
ctttctgttggcatgtcaagagatgctgtgcgttttggccgcatccccaagagagaaaag
cagcgacttctggatgagatgcagagctacatgaacagcctaaatgagtcagccaccgtg
gatgtggacccaccttcagcgaaggacactcccagcaccccagaagatggcaactcaaaa
gaggccattggagccatctccagagcctaccgtgacatcttcaccagcagcaacagccga
gggagagcagcagagagggctaacatcaccaacaacaacatgtctcatgtttttcaggat
gccagttttacccaagtttcctctctcaccacatccacccaaagttatcagtcttgccct
gttgtggctgccactctatgctcagctacgcttgacgacaaacaacctacgtttcacaat
ttggacaacaatcgttacacttacttagtttcaacaaatcagaatcatgatcagtccaac
agtacatctcaaaggggcagctctgccaataataacagttttcccaatgcaggaagtacc
caaaatcagtcctcctgcccatggaaattagcttcaggagctaaactgctggcctgtcct
ctgaatgcgtggcctgtgtcaggggccgagcgcacaagtcaggagatatgggaatccttc
tcgcaatgtttcactcccgctgtcaaggaagtggtggagtttgccaagggtatcccagga
tttcaagagcttagccaacaagaccaggtcatgttgcttaaatcaggcaccttccaggtt
ctgatggtgaggttctgcaccttgttcaatgctaaggagcgtacagtgaccttcctgaat
ggccaaacttaccccctgtccaccctgcaggctttgggcatgggctctctgctggatgcg
atgtttgagttcagtgagaagttgagctccctggggctagagcctgatgaaatggcactc
tttatggctgtggttctggtctctgcagatggttctggcatctctaacatgcgggctgtg
gagcagctacaagagggtctgatccgtgccctacggtcactgattacccgccgtcgccca
gatgacagcaccctcttccccaaactcctcttgcgcttgccagacctgcgcaccctcaac
aatatgcactccgacaaactgttggcctttcgcattgacccttga
DBGET
integrated database retrieval system
