Etheostoma spectabile (orangethroat darter): 116692750
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Entry
116692750 CDS
T08457
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esp03009
]
116692750 (ddx21)
03036 Chromosome and associated proteins [BR:
esp03036
]
116692750 (ddx21)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116692750 (ddx21)
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
Pre-60S particles
Helicases
116692750 (ddx21)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116692750 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
116692750
NCBI-ProteinID:
XP_032377143
LinkDB
All DBs
Position
1:2976213..2986253
Genome browser
AA seq
751 aa
AA seq
DB search
MPSKIIFETEDQAMEDDVDTVAEAEPLKNKTKEGKKLKKKQLQDQEAQEDPDCEPPAPKK
KKKKDKLAVDQMNGHIDETTDMNGNSNGVETPKKIKKKAEGDTEKKKKQKKDIEEAETSG
HSTPNTPVQTPVQTPAQSSEDSASDSEKEPEETPEQKEGAFSNFRISQFTIDKLKARGVS
YLFDIQVKTFNSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQRETVQFARGRPPKILVLT
PTRELAIQVAKDFKDITKKLSLTCFYGGSSYNPQLEAIRNGIDILIGTPGRIKDHLQNNK
LDLSKLKHVVLDEVDQMLDMGFAEQVEEILSSSYQKVSESNPQTLLFSATCPPWVYEVAK
KYMRPECKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCET
KKEANELSLNASIKQSTQTLHGDIPQKQREITLKGFRSGGFEVLVATNVAARGLDIPEVD
LVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVPT
TNDIIKSSSKDAVRFLDSVPAAAIGYFRASAEKLIEERGAVDALAAALAHISGATSLEQR
SLLNSDVGYTTVQMVCSQEMHNLGYAWKSIKEQLGEEFENHIQRMTFLKGKTGVCFDVPA
DKVKEIQDSWKDSRRWQLTVATELPELEEKQFNNRGDRGFGGGGRSDRGGGFRGGRGRSY
GGNGFRNGGGGGGYSNNRGGHKRNFSQAFDY
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaaatcatctttgaaaccgaagatcaagccatggaggacgacgtggacact
gtcgcggaggctgaacccctgaagaacaagaccaaggagggcaagaaactgaagaagaag
cagttgcaggaccaggaagcgcaagaggacccggactgcgaacctccagcaccgaagaag
aaaaagaaaaaagacaagctggcagtggaccaaatgaacggccacatagatgagaccaca
gacatgaacggcaacagtaacggtgttgaaacaccaaagaagataaagaagaaagccgaa
ggagacaccgagaaaaagaagaagcaaaagaaagacatcgaagaggcagaaaccagcgga
cattccaccccaaacacccctgtccagacgcccgtccagacaccggcccagtccagtgaa
gactctgctagtgacagcgaaaaagaaccggaggagacaccagagcagaaggaaggggcc
ttttccaacttcaggatctcccaattcaccattgataaattaaaagctcggggagtctct
tacctgtttgacattcaggtgaagacattcaattctgtatacgatggagaggacgtaatt
gcccaagcccgaacaggaacgggaaagactttttcatttgccatccctttggtggagaag
ctccagagggagacggtgcagtttgccaggggccgccctcccaagatactggtgttaacg
ccaaccagagagttagctatccaggttgctaaggacttcaaagacatcaccaagaaactg
tctctcacctgtttctatggaggcagctcatacaatccacagctcgaagctatccgtaat
ggtatcgatattttgatcggcacccctggtcgcatcaaagaccacctccagaacaataaa
ctggacctctctaaactgaaacacgttgttctggatgaagtagaccaaatgttggacatg
ggatttgcagaacaggttgaagagattttgtcttcatcatatcagaaagtctctgagtcc
aacccacagactcttctgttttcggccacctgccccccctgggtctacgaggttgccaag
aaatacatgagaccagagtgcaaacatgttgatctgattggcaagaaaacacagaaagct
gcaacaactgtagaacatctggccatagcgtgccactggtcacagcgtgcagccgtgatc
ggagatgtgatccaggtttacagcggcagccatggcagaaccatcgtgttctgcgagaca
aagaaagaggccaatgaactttccctgaatgcatccatcaaacagagcacccagaccctc
catggtgatattcctcagaaacagagagagattacgctgaagggcttcaggagtgggggt
tttgaggttctggttgccaccaatgttgcagcccgcggattagacatccctgaagtcgac
ttggtggtccagtgttctccacccaaggatgtggagtcatacatccatcgttcaggacgt
acgggccgggcaggcagaactggagtctgcatctgtttctaccagaggaaagaggaggac
cagctgcgctacgtggaaaacaaagcaggtatcacattcagacgagttggcgtccccacc
accaacgacatcatcaagtcatcaagcaaggatgctgtcaggtttctggattccgttcca
gctgcagccatcgggtacttcagagcgtcagctgagaagctgattgaggagagaggagca
gtcgatgccctagctgctgccctagcacatatatcaggagccacaagtctagagcagagg
tcactgctcaactctgatgttggttacaccactgtgcagatggtgtgttctcaggagatg
cataatctgggttatgcctggaaatcaatcaaagaacaacttggagaagagtttgagaac
catattcagagaatgacctttctcaaaggcaaaacgggagtttgttttgatgtcccagct
gacaaagtcaaggagattcaggacagctggaaggacagtcgccgttggcaactgactgta
gccaccgagctcccagagctggaggagaagcagttcaataaccgtggcgacagaggcttt
ggcggtggtggccgcagcgatagaggaggggggttcagaggtggaagggggcggagctat
gggggaaatgggttccggaatggtggtggcggtggtggttatagcaacaacagaggagga
cacaagcgcaacttcagtcaagcttttgattattga
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