Etheostoma spectabile (orangethroat darter): 116692859
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Entry
116692859 CDS
T08457
Symbol
sort1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116692859 (sort1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
DUF6242_C
NPBW
Motif
Other DBs
NCBI-GeneID:
116692859
NCBI-ProteinID:
XP_032377305
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All DBs
Position
7:complement(11828019..11842466)
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AA seq
821 aa
AA seq
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MGLLLHCVLLLFVSTFTASLDVQQGSEPFGQSFFLKQSNIGKRAANTVKRSLPAWLAASP
GHNIKRRSAEQGDSCKALQGSDTKLAGNTHSYTFNDLSGSVSLAWVGDGTGVILALTTFQ
VPFFMIRLGQSKLYRSENYGKTFQDVTNLINNTFIRSEFGIAIGKSGKVILTGEVSGGHG
SRIFVSDDFGETFTPRDLPFNPLMQITYNPDNSNVLLVLSNSYELWLSEDFGSNWKKIHD
TVCLVKWGRKNTIFFTANHNGSCTDRGMLELKRSTDYGKTIKTVANKLYSFGLGGRFLFA
SVMTGKGTLRMIYVSVDQGETWNMAQLPPVGHEQFYSILGANDEMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTNGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQGG
EWVPLRKPDNSKCDATAKDPDKCSLHIHAAYSIAMKLNVPMLPLTEPNAVGLILAHGSVG
DAISVMKPDVYVSDDGGYTWMKALDGPHYYAILDSGGLLVAVEKSPTQPINKIKFSTDEG
QCWGAYTFTKEPIYFTGLASEPGARSMNVSVWGYRDSLLSQYWISITIDFRDLLTRDCDH
KDYVQWLAHSDDISDPNDGCMLGYKEKFLRLRKDSVCWNGRDYQVNTQPTPCLCTLDDFL
CDFGYYRQENSSECVEQPDLKGKVLEFCLHGNEEQLQTSGYRKIPGDKCEGGKMPERKEI
DLSKRCVSDLVGPELLIDSRSSKSVPIVIMVIFVMLLIIAAGVVFIKKYVCGGRFLVHRY
SVLQQHVEDNAVDGMDDPLETNHTQNGKIEFHDDSDEDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggacttttgctgcattgtgtcctgctgttatttgtttccactttcacggccagttta
gatgttcagcagggatccgaacccttcggacagtcgttttttttgaagcagtcaaacatt
ggcaagagagctgcgaacaccgtaaagaggtctctccctgcctggctggctgcatcacca
ggtcacaatataaaacgaagaagcgccgagcagggcgactcctgcaaagctcttcaagga
tctgacaccaagttagcaggcaacacccacagttataccttcaatgacctgagtggatca
gtgtcactggcctgggttggagatggaacaggggtcatcctggctttgacaacttttcag
gtgcccttcttcatgataagactggggcagtccaaactctatcgaagtgaaaactacggg
aagacattccaggatgtgaccaacctcatcaacaacaccttcatcagatcagagtttggc
attgctatcggcaaatctgggaaagtgatcctgactggagaggtgtctggaggtcatggg
tctcggatctttgtctccgatgactttggagagacattcaccccacgggacctgcccttt
aaccccctgatgcagatcacatacaaccctgacaattccaatgtgctgctggtcctcagc
aacagctatgaactgtggctgtctgaagattttggcagcaactggaaaaagatccacgac
acggtgtgtcttgtgaaatgggggaggaaaaataccatcttctttacagccaaccacaat
ggatcctgcactgatcggggaatgctggaactgaagaggtcaacggactatggtaaaacc
attaagactgttgccaataagctctactcattcggcctgggtggacgcttcctctttgcc
tctgtaatgacaggcaagggcacattgaggatgatctatgtgtcagtggaccagggtgag
acgtggaacatggcccagctgccccctgttggtcacgagcagttctactccatcctggga
gcgaacgatgaaatggtcttcatgcatgttgacgaaccaggagataccggatttggcacc
atttatgtgtcggacgaccggggcactgtgtactccaaatcattggagcgccacctttac
accaccacgaatggcgataccgacttcactaatgtcacctccctgcgaggagtttttatc
accagtgtcctggcagaagataactcggtgcagtctgtggtgtcctttgatcagggaggg
gaatgggttccactgcggaaacctgacaacagcaaatgtgatgctacagccaaagaccca
gacaagtgcagtctccacatccacgcagcctacagtattgctatgaaactgaacgtcccc
atgctgcctctgactgaaccaaacgctgtgggtctcatcttggctcatgggagtgttggt
gatgccatctcagtgatgaagccggatgtgtatgtgtctgatgatgggggttacacctgg
atgaaggcccttgatgggccccattactacgccattctggactctggagggctgctggtt
gctgtggagaaaagccccactcaacctattaacaagatcaaattttctactgatgaagga
cagtgctggggtgcttacaccttcaccaaagagcccatctactttactgggctggcatca
gagccgggagcccgatccatgaatgtcagtgtctggggctacagagactccctgctcagc
cagtactggatctccatcaccattgacttcagggatcttctgaccagagactgtgatcac
aaggactacgtgcagtggttggcccactctgatgacatcagtgaccccaatgatggttgc
atgctgggctacaaagagaagtttctgcgtctcaggaaagactctgtttgctggaacgga
cgagattatcaggtcaacacccagccaaccccgtgtctgtgcaccctggatgacttcctg
tgtgattttggatactaccgtcaagaaaacagctcggagtgtgtggagcagccggacctg
aaaggcaaagtgcttgagttctgtctgcacggcaatgaggaacaactgcagaccagtggc
tataggaaaattcctggagataaatgtgagggaggaaagatgcccgagcgtaaagagata
gacctcagcaagaggtgtgtgagtgacctggtgggccctgaacttctgatagacagtcgc
tcctccaagtctgtacccattgtgataatggtcatcttcgtcatgctgctgatcattgcc
gccggagttgtcttcatcaagaaatatgtctgtggtggcaggttcttggttcacaggtac
tcggtgctgcagcagcatgtcgaggacaatgctgttgatgggatggacgacccgttggag
accaaccatactcaaaatggcaagatagagtttcacgacgactcagatgaggacctgctt
gaatag
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