Etheostoma spectabile (orangethroat darter): 116692975
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Entry
116692975 CDS
T08457
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116692975
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116692975
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF7310
DUF2573
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
116692975
NCBI-ProteinID:
XP_032377521
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All DBs
Position
7:complement(21433899..21483442)
Genome browser
AA seq
1822 aa
AA seq
DB search
MKRTCCQRDSLMSMRPGIMMSIVAQYLSLLTLALSVFGQELPSSPHGCTDGSCYPATGNL
LIGRAVNLSATSTCGLNGPQPYCIVSHLQESDKCFECNSQHRFDPYRHRNSHRIENVIYL
MDGNGDNTWWQSVNGEESVSIRLNLEAEFHFTHLIIKFKTFRPAAMFIERSADFGRTWRP
YRYFASNCTKTFPGIPANGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSL
DIQELLRITNLRINFTKLNTLGDDLLDRRFDVLQKYYYAIYELVVRGSCFCYGHASECAP
VPGVDARENGMIHGRCVCKHNTEGLNCERCRHFHNDLPWRPAEAENPHTCRDCEMCKPFY
YQDPNRDVRDPQACVACDCDPVGSMEGGVCDSHTDLDVGMISGQCRCKANVKGTRCDDCK
ESYYGLSQNDPLGCQPCNCDPRGIIMVGAPCDQISGDCSCKRYVTGRYCNQCLPEYWGLS
NDLAGCRPCDCDFGGAFNNRCMMESGQCDCRRHLIGRQCSEVQPGYFCAPLDYYKYEAED
ATGHSPSDSALPGKVRPQAETDCVQHLSNQLRRHRRHRRITNSQQHRAALRRIRQLQQTP
DVRTVHREHTPSHMVTWTGPGFARVKDGAGLVFTIDNIPYAMEYDIMIRYEPESTEDWEA
IVSITSVMLPSSLRCGNLLPTEQLYTVTLPHRNRYIQMPRPFCFEPSNRYVVSIRFQRHG
VTHRHLTAFILIDSLVLIPKYTELPGFQGNEPEAEQRREEMIRYMCLDSFMITPMPALAE
MCSKLICSISSIIHDGALSCQCDPQGSLSGECHKVGGDCHCKPNVMGRRCDQCAPGTYGF
GANGCTVCDCHSEGSLSHQCDPVTGQCQCRHGATGRQCSDCQPGQWGFPSCSPCQCNGHA
DICDPRNGECRDCRDYTTGHLCERCADGFFGNPVLGSGDHCRPCPCPGNPGSDHFNAHSC
HADHTSNQIICNCRQGYTGLRCDQCAPGYYGNPEQYGGQCLPCECNGNIDTNDPGSCDPR
TGQCLKCLYHTDGPSCDHCQHGYYGSALAHDCRLCTCVTAGTIHSACSDGQCHCDRQTGA
CPCRQNVAGHNCDQCAPNHWNYGQDSGCEHCGCDPQHALGTNCNMFTGQCQCRPGFGGTQ
CTECEQFHWGDPRLQCQECNCHPQGSEMTQCDRSTGACECKEGAAGKHCDECARGFTGDF
PKCVQCHPCFHQWDDVVCQIKRDLEHIQYTAQKILESGVTPGVGDTRIKELERKLKEVQD
LIGMEDSNRIHQLIGQSIDDLRAEIALTDGRLMAVTRELNTTADEEEALRRILSVLEKEL
TDINATVAHKQRLLDNYLTSGFADQFEKVKKNYQESVKAEKKCNASVSGPLSPVEQSKET
RAVTEDLLDASKVKFLRALAAQNKSLSELQQKAHDLDKKVHHLSHKVCGGHSNASVNGSC
PDSQCGGAGCHDDQGNRVCGGHGCNGTVSTSVAALDHARNATDSLNAAKEELQSVAKKLQ
DIASLTQDVKNQAMNTLKKAQKKKDHFENNNKKLKDFIKKIRDFLTEEGADPESIEKVAL
QVLSITLPVNKTALDQMVMQIKNSLSNLTNIEGIVNQTSQHISIAKELLDKAKDAKSRAE
GVKDTANNTKQALDMSEKAIEKARAALKEANNNLNSTRNATVEVDERLTLLEDKQMDVMM
RLSNLSREVEALRNKTEQNRQMAKDAMALANNATQVASSLEQSLNDTENRYQELQMKVDS
LGGESGGLNSINQKAQDIKNEAEDLLSQATKGIDQLKKLEKKFKSNEQRMQKQRMELDEL
KENATLVRDVIREQVQKYSNCV
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacgtgttgccagagagacagcctgatgtccatgcgtccaggcatcatgatg
tccatcgtggctcagtatctgagccttctcacgctggctctcagtgtgtttggacaggag
ctcccatcaagccctcatggttgcactgatggcagctgctaccctgcgacaggaaacctt
ctgattggacgggctgtcaatctatccgccacgtctacttgcggcctgaacgggccgcag
ccctactgcattgtcagccatctgcaggagtccgacaagtgctttgagtgtaactcccag
catcgctttgacccgtaccgccacagaaacagccaccgcatcgaaaacgtgatctacctc
atggacggcaacggagacaacacatggtggcaatctgtcaatggagaggagagtgttagc
atcagactgaacttggaggctgaattccacttcacgcatcttatcataaagtttaagact
ttccgacctgcagccatgttcatcgagcgttcggctgattttggccgcacttggcgcccc
taccgctactttgcctcaaactgtaccaagacctttcctggcatccctgccaacggcctg
caccacatcaacgacatcatctgcgaggagcgctactccgacatcgaaccctccactaat
ggagaggtcatttataaggttttggatcccgctattcatgtgaaagacccatacagcttg
gacattcaagaacttctgcgtattaccaacctgcgtatcaactttactaagcttaacact
ctgggagacgacctgctggaccgacgcttcgatgtcctgcagaaatattactacgccatc
tatgagctggtggtcagagggagctgcttctgttacggacacgcctcagagtgcgcccca
gtgccaggggtggacgcccgggagaacggcatgatccacggtcgatgtgtatgcaaacat
aatacagagggcctgaactgcgagcgctgccgacatttccacaatgacctgccctggaga
ccagcggaggcagagaacccacatacttgcagagactgtgagatgtgcaaacctttctac
taccaagaccctaatagggatgtcagggacccacaagcctgtgttgcctgtgactgtgac
ccagtcggatcaatggagggaggagtatgtgacagtcacaccgacctggacgtgggtatg
atctcgggacagtgtcgctgcaaagccaacgtcaaaggcacgcgctgcgacgactgcaag
gaaagttattacggactcagccagaatgacccgttgggctgtcagccttgcaactgtgac
cctcgtggcatcatcatggtgggagctccttgcgaccagatcagtggggactgctcctgc
aaaagatatgtcactggtcgctactgcaaccagtgtctgcctgaatactgggggctcagc
aacgacttggccggctgcagaccatgcgactgtgacttcggtggagccttcaacaacagg
tgcatgatggagagcggccagtgtgactgcaggaggcatctgattggtcgacagtgttca
gaggttcagcctgggtatttctgtgcgccgctggactactacaaatacgaggcagaagac
gccactggacactcccccagtgactctgcactgccgggcaaagttcgtcctcaggcagag
accgactgtgttcagcacctcagcaatcagctgaggaggcaccggcgtcaccgtcgtatc
accaactcgcagcaacatcgggcagcgctgagacgtatccgccagcttcaacaaacaccg
gatgtgaggaccgttcatagagagcacactcccagtcacatggtgacgtggacaggacct
ggttttgcccgtgtgaaagatggtgccggcctggtgttcactatcgacaacattccctac
gccatggagtacgacatcatgatccgctacgaacctgagtcaacagaggactgggaggct
atagttagtataacatctgtaatgctgccgtccagtctccggtgtggaaacctcctacca
actgaacagctctatacagtgactctgccgcaccgcaacagatacatccagatgcccagg
ccattctgtttcgagcccagtaatcgttatgtagtttcaatcaggttccagcgccacggg
gtcacacacagacatctcactgctttcattctcattgactcgctggtcctgatccccaaa
tacactgagcttcctggtttccaaggcaatgagccagaagcagagcagcggcgggaggag
atgattcgctacatgtgtctggattcctttatgatcacaccgatgcccgccctggctgag
atgtgctccaaactcatctgtagtatttcatccatcattcacgatggtgctctgtcctgt
cagtgtgaccctcagggctccctcagtggtgagtgtcataaggtgggaggtgattgtcat
tgtaaacccaacgtgatgggtcgacgctgtgaccagtgtgccccaggaacctacggcttt
ggagcgaatggctgcactgtgtgtgactgccactcagagggttcattgagccaccaatgt
gacccggttacaggccagtgccagtgtaggcatggagccactgggcgtcagtgctcagac
tgccaaccaggccagtggggcttccccagctgcagcccctgtcagtgtaacggccacgca
gacatctgtgacccccgcaacggggagtgtagagactgcagggactacacaaccggacac
ctttgtgaacgttgtgcggatgggttctttggaaacccggtgcttggttcaggggatcac
tgtcggccctgcccctgccctggtaaccccggctcagatcactttaatgcacactcctgt
catgctgaccacacctctaaccagatcatctgtaactgcaggcaaggctatactgggctc
cgctgtgaccagtgtgcccctggttactatggcaacccagagcaatacggtgggcagtgc
ctcccgtgcgagtgcaacggcaacatcgacaccaatgaccctggctcatgtgaccccagg
actggccaatgcctcaagtgtctgtatcacactgacggtccgtcctgcgaccactgtcaa
cacggttactatggcagtgctctggcccacgactgcagactttgtacctgtgtgactgct
ggcaccatccactctgcttgcagcgatggacaatgtcactgtgaccggcagacgggagcc
tgtccttgcaggcagaacgtggccggccataactgtgaccagtgtgctcctaaccactgg
aactacggtcaggacagcggctgtgagcactgtggctgcgacccacaacacgcacttgga
actaactgcaacatgttcacaggccagtgccagtgtcgtccaggctttggaggtacacag
tgcactgagtgtgagcagttccactggggagacccacggctgcagtgtcaagagtgtaac
tgccatccgcagggctcagagatgacccagtgcgaccgatcaacgggggcgtgcgagtgc
aaggagggagcagcggggaagcattgtgatgaatgcgctcgcggcttcaccggcgacttt
cccaagtgtgtccagtgtcacccgtgcttccatcagtgggacgatgtggtgtgccagatc
aaaagggacctggaacacatccagtacaccgcgcagaagatcctggagagcggggtcacg
ccgggagttggggacacacgcatcaaagagctggagaggaagttgaaagaagtgcaggat
ctaatcggtatggaggacagcaacaggatccaccagctgattggacagagcattgatgac
ctcagggctgagatcgccctgaccgacggacgtttgatggccgtcacccgagagctaaat
acaacagcagacgaagaagaggcactgagacgcatattgagtgtcctagagaaagagctg
acagacatcaacgccactgtggctcacaaacagcgcctgctagataactacctcacctcc
ggatttgcagatcagtttgagaaagtgaagaagaattatcaggaatctgtgaaggctgag
aagaaatgcaacgcttcagtgtccggtcctctcagtccagtggaacagtccaaagaaacc
cgcgctgtcactgaagacctgctggacgccagcaaagtcaagttcctccgagctctggct
gctcagaacaaatcattaagcgagctgcagcagaaagcccacgacctggacaagaaagtc
catcacctcagtcacaaggtatgtggtggtcatagcaatgccagtgtcaacggcagttgc
ccagacagccaatgcggcggtgccggttgccacgacgatcaggggaatcgtgtatgtgga
ggacatggatgcaatgggacagtgagcacgtctgtagcagcactggatcatgccaggaac
gccactgacagtctgaacgctgccaaagaggagctgcagagtgtggcgaaaaagctccag
gatatagcctctctgacacaggatgtgaagaaccaggcgatgaacacgctgaagaaagcc
cagaagaagaaggaccactttgaaaacaacaacaagaagctcaaagatttcattaagaag
atcagagacttcctcactgaggagggagcagacccagagagcatagagaaggtggctctg
caggtgttgtcgatcacgctgccggtcaacaagaccgccctggaccaaatggtcatgcag
ataaagaacagcctttccaacctcaccaacatcgaggggatcgtcaaccaaacctcgcag
cacatcagcatagccaaggagctgcttgacaaagctaaagatgccaagagccgggcagag
ggagtgaaggatacagccaataataccaagcaggcattggatatgtctgagaaggccata
gagaaagccagagcagctctgaaggaggccaacaacaacctgaacagcacaaggaatgct
acggttgaggtggatgagaggctaacgctgctggaggataagcagatggatgtcatgatg
cgtttaagtaacctttccagagaggtggaagctctgaggaacaagacggagcagaacaga
caaatggcaaaggacgccatggcactggctaacaacgccacacaagtcgcatcctcactt
gagcagagtctcaacgacacggagaatcggtaccaggagctgcagatgaaggtggactct
ctcggcggggagtctggaggtctgaatagcatcaaccagaaggctcaggacatcaagaat
gaggcagaagacctcttaagccaagccaccaaggggatagaccaactcaagaaactggag
aaaaagttcaagagcaacgagcagcggatgcagaagcagcgcatggagctggacgagctg
aaggaaaacgcaaccttggtgcgggacgtcatccgggaacaagtgcagaagtacagcaac
tgtgtgtga
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