Etheostoma spectabile (orangethroat darter): 116693044
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Entry
116693044 CDS
T08457
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116693044 (dhx35)
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116693044 (dhx35)
Spliceosome [BR:
esp03041
]
Complex C
Other components
Complex C specific factors
116693044 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_7
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
116693044
NCBI-ProteinID:
XP_032377606
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All DBs
Position
7:complement(7577844..7586021)
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AA seq
699 aa
AA seq
DB search
MAAPLSTMKFWKPGSEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWATEGKVIGVTQPRRVAAISVANRVAE
ERGALVGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
MYTDIAIGLLKKIQKKRQDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARSLS
RYGMKKHLRILPMYSGLPYAEQMKVFERAPNSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPSNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVYGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTA
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctttccacgatgaaattttggaagccggggtctgaggctccgggaatc
tcagaggagcgggagctcaacacagagacaaccggctcccccatcatcttcaacccgcac
acagccctgtccatagagaaacagcgacagaaactccctgttttcaagcacagaaacaac
atcttatacttggtggagagcttccagactgtcatcatagttggtgagacgggatgtggg
aaaacaacacaaatacctcagtacctgctggaggctggctgggcgacggaggggaaggtg
attggagtgacacagccccggcgtgtggctgccatctctgtagctaaccgtgtagcagag
gagcggggggccctggtgggacatgaggtgggctacaccatccgatttgatgactgctcc
gatccccacgccacaaggatcaagttccttacagatggcatgttggtgcgggagatgatg
gctgatcctcttttgaaaaaatacagtgtgttgatgctggatgaagcacatgagagaacc
atgtatacagacatagccattggtctactaaagaagattcagaaaaagcggcaagacctg
aggctgattgtggcctctgccactctggatgccaagaaattccacgacttcttcaacctg
aacgagtccggggatcctaacaaggacacgtgtggaattctgacagtggagggacgtacc
tttccagtggatgtcttctacactgtcagtcctgtcccagactatgtgaaggccacagtg
gagacagtgctgaagatccatgagacggaggatgatggagacgttctggcttttctaact
gggcaggaagaggtggagaaagtggtgtcccttctgcaggaccaggccaggtctctatca
cgatacggcatgaagaaacacctgagaattttgcccatgtactctggtctaccttacgct
gagcagatgaaggtctttgagagggcgcccaactctgttcgcaaggttgtggtggccaca
aacatagctgagacctccatcaccataaatggagttgtatttgtcattgactgtgcattt
gtgaagctgcgagcctataaccctcgcactgccattgaatcgctggtggttactcccatc
tccaaggcttcagccagccagagggctgggagagccggacgaaaccgacctgggaaatgc
ttcagactatacacagaggaggactttgagaaactgcctgcctctactgtgccagagatg
cagcgcaccaatttggcccccgtcatcctgcagctcaaagcattaggcattgacaacgtg
ctgcggttcagcttcctttctcctcctccagctcagaccatggttcaggctctagagctg
ctctacgctctgggaggtctggaccattacggacgtttgactgatcccatgggtgtgcgg
atggcagaatttcctctcagtcccatgtttgccaagatgctcctcgagtcaggaaacttt
ggctgctccaaagagattgttaccattgcagcaatgatgcagattcagaatatatttgtt
gtgccgtccaatcagaagaaagctgctgcccgagagcacaggaagtttgcagttgctgag
ggagaccacctcaccatgctgaatgtgtatgaagcattcattaagcaccagaaaagctcc
cagtggtgtcaggaacacttcctcaattataagggcctgctgcgggctgtgactgtacga
gagcagctccggcgtctcatgaacaagtttaaggtgccacggacttcaagtgaaggggac
cctgatgtgatcttgaagtgcattgtatatggtttttttgctaatgcagcccgcatccac
cattctggttcctaccgaactttaagagacgaccgcgagcttcacatccaccccaactct
gtgctgtttggagagaaacctccaaaatgggttgttttcaatgaagtggtgcagacggca
aaatactacatgcgcgatgtgaccgctgtggaatcgtcctggttggtcgagttggcccct
cacttctacaagcaggccaagcatggttcactggctagcaagaggtcccgggtcctctga
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