Etheostoma spectabile (orangethroat darter): 116693057
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Entry
116693057 CDS
T08457
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116693057 (ybx1)
03019 Messenger RNA biogenesis [BR:
esp03019
]
116693057 (ybx1)
03041 Spliceosome [BR:
esp03041
]
116693057 (ybx1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
116693057 (ybx1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116693057 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
116693057 (ybx1)
Spliceosome [BR:
esp03041
]
Common components
Common spliceosomal components
General mRNP proteins
116693057 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
116693057
NCBI-ProteinID:
XP_032377626
LinkDB
All DBs
Position
7:complement(14899012..14904007)
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AA seq
328 aa
AA seq
DB search
MSSEAETQQPPQPADDVESPSSPAAASSAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGIAVQGSKYAA
DRNRYRRYPRRRGPPRGGEYPENYQSDGEGEPSSGGSGGRDKSSRDGGESAPEGDAPQQQ
RRPTYPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDESQGGPDQGNKPARQSYYR
GFRPRFNPRGPPRPRPVRDGEEDKENQGGEGGQNQQPRQRRYRRNFNYRRRRPQTGGKPG
QETKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaaccgccgcagcctgctgacgatgtggagagccca
tccagcccggcagccgcatcttccgcgggggataagaaggtcatcgcaacaaaagtcttg
ggtacagtcaaatggttcaacgtcaggaatggatatggttttatcaataggaatgatacg
aaagaggacgtttttgtacaccagacagccatcaaaaagaacaacccgaggaaatacctt
cgcagtgttggagatggagaaactgtggagtttgatgtagttgagggagagaagggagca
gaggcggcaaatgtcactggccctggaggcattgcagttcaaggaagtaagtacgcagct
gacaggaaccgctataggcgctatcccagaagaaggggccctccccgtggtggagaatat
ccagagaactaccagagcgatggagagggtgagccaagcagtggaggcagcggaggtcgt
gacaaaagcagccgagatgggggagaaagtgcccctgaaggagatgcgccacaacagcag
cgaaggcccacttaccctggaagacgacgctacccgccatactttgtacgtagacgctac
ggccgccggcccccgtataccaacgcaccacgtggagagatgactgagggaggcgagggt
gacgagagccaaggaggtcctgaccagggcaacaaaccagcgaggcagagctactacaga
ggcttcagaccaaggttcaatccaaggggtccaccccgtcccagaccggtgcgggacggt
gaggaggacaaggagaatcagggtggcgaaggtggtcagaaccaacagccccgtcagcga
cgttaccgccgtaacttcaactaccgtcgcagacgcccacagactggaggcaaacctggc
caagaaaccaaggaggccaagacaggaggtgacccatctgcagagaaaacgtccgctccc
gaggctcagcagggtggggctgagtag
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integrated database retrieval system
