Etheostoma spectabile (orangethroat darter): 116693061
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Entry
116693061 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 3-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116693061
Membrane trafficking [BR:
esp04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116693061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
116693061
NCBI-ProteinID:
XP_032377637
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All DBs
Position
1:complement(20681523..20691889)
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AA seq
827 aa
AA seq
DB search
MGLTELLLALVWLRSARLGAAGCSERVEVHTERRGVIYSPSWPLNYPPGVNCSWHIQGGQ
GEVLTISFRNFDVAESGNCLGDWLLLTPTRSGDSRLCGSMLPPPFISTRGRVWLYFHSQA
NSSGQAQGFRLSYIRGHLGQSSCQSDEFLCGNGKCLPRSWKCNGQDECGDATDERSCSPP
PTEAXAWPLPFGSLPCTEAQSTRCLPAALRCNGARDCPDGTDELGCPDTTCGKRLGNFYG
SFASPDFFRANRTAVAELRCSWSLDTQDPKPIVLQLDLQLGPGDSLHVYDGLVQHAEHLL
QVLSYHNNRRPALLESSRGQMSVLYMAQPHSPGHGFNATYQVKGYCFPGERPCGSDQGCY
SERQRCDGYWHCPSGRDEEACRTCPDGEFPCEGGTGVCYPASERCNNQKRCPDGSDEKNC
YDCQPGNFHCGTNLCIFETWRCDGQEDCLDGSDERDCLAAVPRKVITAALIGSLVCSLLL
VIALGCALKLHSLRNREYRAFETQMTRMEAEFVQREAPPSYGQLIAQGLIPPVEDFPVYN
PTQASVLQNLRLAMRRQIRRHSTRRSTTSSSRRRLGHLWTRLFHSAGRTRGHAPLLDSPG
PTQITLGLHSYRTVGVQGSLARARSGAGLQDDSDGMGMPGSCCSATMDLQSCTPESPASP
LSLQSVDSPEEEDLSPVSMGSSRAPQSEPPTPVQSNLSAQEASVPPCHTRASRKLVLELA
VNLKGVSLRRYSPMGPLSPVSPPVLPSSSQTAPPHPRSQGLEVTSPLEPLSSSVKAEDSN
SHFAVEVPSREIRSRDERRREGKSRLCRFSRTFSDEGGDLGRETTPC
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgggactgacggagctgctgctcgcgctggtctggctccgctcggctcggctcggtgca
gcaggctgcagtgaacgagtggaggtccacactgagcggaggggggtcatctacagcccc
tcgtggcctttaaactacccccccggtgtcaactgcagctggcacatccagggcggtcag
ggagaggtcctcaccatcagtttccgtaatttcgacgtagcggagtcagggaattgtctg
ggggactggctcctgctgactccaacgaggagtggggactccaggctgtgtggctccatg
ctgcctccgcccttcatctccaccagggggcgcgtttggctctatttccactctcaggcc
aacagctcggggcaagcccagggcttccgcctgtcctacatcagaggtcacctgggtcag
agcagctgtcagtcggatgaattcctgtgtgggaacgggaagtgtcttcctcgctcctgg
aagtgcaacggtcaggatgaatgcggcgatgccacagacgaacgcagctgctccccccct
cccactgaggccncggcctggcccctgcccttcggctccctcccgtgcacagaggcccag
tccacccgctgtctgcctgctgccctgcgctgcaacggagcccgggactgtcccgatggc
acagatgagctgggttgccccgacaccacctgtggcaaacgtctggggaacttctacggc
tcctttgcttctccagattttttccgggctaacaggaccgccgtggcggagctgaggtgt
tcgtggtctctggacactcaggaccccaagcccatcgtgctgcagctggacctgcagctg
gggcccggagactcgctgcatgtctacgatggcctggtccagcatgcagagcacctctta
caggtgttatcatatcataataacaggcgcccggcactgctggagtccagtcggggacag
atgagtgttttgtacatggcccagcctcacagccctggacatggcttcaacgccacatac
caggtcaaaggttactgttttcccggcgagcgtccctgtggcagcgatcagggctgctac
tctgaacgccaacgctgcgacggctactggcactgcccctctggccgcgacgaggaggcc
tgtcggacgtgcccagacggggagttcccctgcgagggtggtactggggtgtgctacccg
gcctctgagcgctgcaacaaccagaagaggtgcccggatgggtcggacgagaagaactgc
tacgactgccaacctggaaacttccactgtgggaccaacctgtgcatctttgagacgtgg
cgttgtgacggccaggaggactgcttggacgggagcgatgagagggactgcctggcagcg
gtgcccaggaaagtgatcacggccgccctgatcggcagtctggtctgtagtctcctgcta
gtcattgctctgggctgtgccctcaaactccactccctcaggaacagagagtacagagct
tttgaaactcagatgactcgcatggaggccgagtttgttcaaagagaagcccccccttcg
tatggtcagttaatcgcccagggtctcatccctccggtggaggatttcccagtgtacaac
cccacccaggcctctgtgttgcagaacctgcggttggcgatgcgcagacagatccgacgt
cactccacacggcgctccacgacctcctcctctcgtcggcgtctcggccatttgtggact
cgtctgtttcacagtgcggggcgaaccagaggccacgccccgctgctcgactcccctgga
cccacacagatcacactggggctccacagctaccgaactgtgggtgtgcaggggtccctg
gcaagggccaggtctggagctgggctgcaggatgactctgatggaatgggtatgcctggc
tcctgctgctcagccaccatggacctgcagtcatgcacgccagagagtcctgcatccccg
ctctcattgcagtcagtggacagtccagaagaggaggatctctcgcctgtcagcatggga
agcagtagggctccacagtctgagccccccacccctgttcagagtaacttgtcagcccag
gaagcctctgtgcccccttgccacacccgggcatctaggaaactagtcctggagctcgct
gttaacctgaagggtgtttccttgagacgttactcccccatggggcccttgtcccccgtc
tcaccccctgtgcttcccagcagctcccagacagccccaccccaccctcgctcccagggg
ctggaggtgacttcacctctcgagcccttgtcttcttctgtgaaagcagaggacagcaac
agccactttgccgtggaagtgccaagcagagaaataagaagcagggatgagaggaggagg
gagggcaagagcaggctctgcaggttcagcaggaccttcagtgatgaggggggagattta
gggagggagacgacaccatgctga
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