Etheostoma spectabile (orangethroat darter): 116693413
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Entry
116693413 CDS
T08457
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116693413 (thrb)
04081 Hormone signaling
116693413 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116693413 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116693413 (thrb)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116693413 (thrb)
Nuclear receptors [BR:
esp03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
116693413 (thrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PAP_central
Motif
Other DBs
NCBI-GeneID:
116693413
NCBI-ProteinID:
XP_032378267
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All DBs
Position
8:30166872..30286398
Genome browser
AA seq
516 aa
AA seq
DB search
MMNFCIPDMYDMPHSGLGGYSAQGGGEHCMYAAGEGLTGYGPGYRPGYGYSEPQPPPCTE
QAWPPGQHYSCSYAGGPPVFKSEFRSMEISLSHYHHQPEYFPEIKPDMSHLQWVQEAHRK
GYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVID
KVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRKEELQKTVWDRQEP
TQEEWDLIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNEITCNLFYTSDQSAAGVKET
KPEENCQASMVNTPEGNKVDIEAFTQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILL
KGCCMEIMSLRAAVRYDPESETLTLNGEMAVTREQLKNGGLGVVSDAIFDLGVSLSSFNL
DDSEVALLQAVILLSSDRPGLSSVERIERCQEEFLLAFEHYINYRKHKVTHFWPKLLMKV
TDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacttctgcatcccagacatgtatgacatgcctcactctgggctgggaggctac
tcggcgcagggcggcggggaacactgcatgtacgcggcgggcgagggactaaccgggtac
ggacccgggtacagacccgggtacggatacagtgaaccccagcctccgccctgcacggag
caggcttggccgcccggccagcattactcctgctcgtacgccgggggcccgcctgttttt
aagagcgagtttcgcagcatggagatctctctcagccattaccaccaccagcctgaatat
ttccctgagatcaaacctgacatgtcacacctgcagtgggtgcaggaggcgcaccgcaaa
gggtacattccaagttacctggacaaggatgagctctgtgtagtgtgcggggacaaagcc
accggctatcactatcgctgcatcacctgcgaaggttgcaagggtttcttcaggcggacg
attcagaagaacctcaacccgacctacgcctgtaagtacgaggggaaatgtgtcatcgac
aaagtgaccaggaaccagtgccaggaatgccgcttcaagaagtgcatcgcggtgggcatg
gcgaccgacttggtgctggatgacagcaagaggctggccaagcggaagctgatcgaggag
aaccgggagcgccgtcggaaggaggagctgcagaagacggtgtgggaccgacaggagccc
acccaggaggagtgggacctgatccgcatggtgacggaggcccacatggccaccaacgcg
cagggcaaccactggaagcagaagcggaaattcctggtcgaggaagctatgcttctaaat
gaaataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaaact
aagcccgaggagaattgtcaagcgtccatggtcaatacacccgaaggcaacaaagtggat
atagaagccttcactcagtttacaaaaattatcacccctgccataacccgagtggtggac
tttgccaaaaaactgcctatgttttgtgagctgccttgtgaggaccagatcatcctgttg
aaaggctgctgcatggagatcatgtcgctgcgagccgccgtccgctacgacccggagagc
gagacgctcacgctcaacggcgagatggcggtcacgcgggagcagctgaagaacggaggc
ctgggcgtggtctcggacgccatcttcgacctgggcgtgtcgctgtcctcctttaacctg
gatgactcggaggtggctctcctacaggccgtcatcctgctttcatctgatcggccgggc
ctgagcagcgtggagcgaattgagcgctgccaggaggagttcctgctggcctttgaacat
tacatcaactaccgcaaacacaaagtgacgcatttctggcccaagctgctaatgaaggtg
acggacctgcggatgatcggcgcctgccacgccagccgattccttcacatgaaagtggag
tgtcccaccgagctattccctcctctcttcctggaggtctttgaggactga
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