Etheostoma spectabile (orangethroat darter): 116693457
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Entry
116693457 CDS
T08457
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03020
RNA polymerase
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116693457
09124 Replication and repair
03420 Nucleotide excision repair
116693457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116693457
03400 DNA repair and recombination proteins [BR:
esp03400
]
116693457
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116693457
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116693457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
116693457
NCBI-ProteinID:
XP_032378344
LinkDB
All DBs
Position
8:complement(32862393..32868238)
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVATIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVFPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFFYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacggtgaaaatcacagaactgacagacgaaaatgtcaaa
tttgtcattgaaaacactgacttggcggttgcaaactctatccgccgcgtcttcatgtca
gaagttgccactatagcaattgactggatccagatcgatgccaattcatcagtactgcac
gacgagttcattgcacacagagttggtctcatacctctcacaagcgatgacattgtggac
aaaatgcagtattctagggactgtacctgtgatgacttctgcccagagtgttctgttgag
ttgacgctggacgtgcgatgcactgaggaccagacgcggcatgtcacgtcgcgagacctt
ctgtccaacaaccccagagtcatcccggtgacttctaggagtcgagacaatgatcccaat
gactacgttgaacaagacgacattttactggtgaagctgcgtaaaggtcaggaactgcgg
ctcagggcgtacgccaagaagggcttcggtaaggagcacgccaagtggaacccaacagcg
ggggtttccttcgagtacgacccagacaacgcactgaggcacacagtcttcccacgacct
gaggagtggccaaagagtgagtactcagagattgaggaggatgaggttcaggctccctac
gaccccaacgggaaaccagaaaggttcttctacaacgtggagtcgtgcggctccctgcga
cccgagaccatcgtcatgtcggcgctggccgtcctcaagaagaagctcagcgacctgcag
acccagctgagccacgagatccagagcgacgtgctcaccatcaactga
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