Etheostoma spectabile (orangethroat darter): 116693647
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Entry
116693647 CDS
T08457
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116693647 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116693647 (sf3b3)
03041 Spliceosome [BR:
esp03041
]
116693647 (sf3b3)
03036 Chromosome and associated proteins [BR:
esp03036
]
116693647 (sf3b3)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116693647 (sf3b3)
Spliceosome [BR:
esp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
116693647 (sf3b3)
Complex B
116693647 (sf3b3)
Complex C
U2 SnRNP specific factors
116693647 (sf3b3)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
116693647 (sf3b3)
TFTC complex
116693647 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
116693647
NCBI-ProteinID:
XP_032378636
LinkDB
All DBs
Position
8:1266117..1296478
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GADGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVSGGFIYTYRLISGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIYTIGQRVIVTDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESMVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttacaacatcaccttacagcgtgccacgggcatcagtcacgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttctaggggaaagatcttggaatta
ttgcggccagacgccaacacaggaaaggtgcacactctgcttacagtggaggtgtttggc
atcgttaggtccctgatggcattcagactcactggaggaaccaaagactacattgttgtt
ggaagtgacagtggtcgtattgtcatcctggaatatcatccatccaaaaacatgtttgag
aagatccatcaggaaacttttggaaagagtggctgccggcgcatcgtccccggacagttc
cttgctgtcgacccaaaaggccgagctgttatgataggagccattgagaaacagaagctg
gtttatattctgaacagagatgcagctgcaagattgactatctcctctccactggaagcc
cataaagcaaacacgttggtctaccatgtagtaggagtcgacgtcggctttgaaaatccc
atgtttgcctgcctcgagatggactatgaggaagccgacaatgacccaactggagaagct
gccgccaacacgcaacagacactcaccttttacgagctggatctcggtttgaatcacgtg
gtccgcaagtacagtgaggctttggaagagcatgggaatttcctcatcactgttcctggt
ggtgcagatgggcccagtggagttctgatctgctctgaaaactacatcacttacaagaat
tttggagaccagcctgacattcgctgtcccatcccacggcgcaggaatgacctggatgac
ccagagcgtggcatgatatttgtctgctcagccactcacaagaccaagtccatgttcttc
ttcctggcccaaactgagcagggagacatctttaaggttaccctggaaacagatgaagaa
atggtaacagaaatcaggctgaaatactttgacactatccctgtggcaacagccatgtgt
gtcctgaagacgggcttcttgtttgtgtcttcagaatttggaaaccattacctttaccag
atcgcccacttgggtgacgatgacgaggagcctgagttctcctctgcaatgccactggaa
gagggagacaccttcttcttccaaccccgccccctcaaaaatcttgtgctagtggacgaa
caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagataca
ccacagttgtacgttgcctgtggacgaggaccacggtctactctgagggtccttagacat
ggattggaggtatcagagatggctgtgtctgagctgcccggtaaccccaatgctgtgtgg
acagtacgcagacatgtggaagatgagtttgatgcctacatcatagtatctttcgtgaac
gctactctggttctgtctatcggggagactgtagaggaagtgacagattctggatttctg
ggaacaacgcctactctctcctgctcactgctcggtgaagacgcgctagtgcaggtgtac
ccagatggtattcgccatatccgagctgacaagcgtgtgaatgagtggaagactcctggc
aaaaaaaccattgtccgctgtgctgtgaaccagcgtcaggttgttattgcactcactgga
ggggagctggtctactttgagatggacccgtctggccaactgaatgagtatacagagcgg
aaggagatgtctgcagatgtggtttgtatgagcctggctaacgttccacctggcgagcaa
cgctcgcgattcctggccgtgggacttgttgacaacactgtccgaatcatctccctggac
ccttcggactgcctacagccgctgagcatgcaggccttgccagcccagccagagagtctg
tgtattgttgagatgggaggggtcgagaaacaggacgaacttggagaaaagggaaccatc
ggcttcctttacctcaacatagggcttcagaatggtgtgctgctgaggactgtgttggac
ccagtgacaggtgacctgtcagataccagaacgcgatacttggggtcgcgacctgtcaaa
ctcttcagagtccggatgcagggacaggaagctgtgctggcaatgtccagtcgctcctgg
cttagctattcgtaccagtctcgtttccatctgacccctctgtcatatgagactctagag
tacgcctctggctttgcctccgagcagtgccctgagggcatagtggccatttctaccaac
acattgagaatcttggctttagagaaattaggtgccgtcttcaaccaggtggcctttcct
ctgcagtacactcccagaaaatttgtaatccacccagagaccaacaacctcattttgatt
gagacggaccacaatgcatacactgaggcaaccaaagcccagagaaagcaacaaatggct
gaggagatggtggaagctgctggtgaggatgaaagagaattggctgccgagatggccgct
gcctttctaaacgagaatctcccagaagccatatttggtgcacctaaagctggagcagga
cagtgggcctcgctggtgcgtctggtcaatcccatacagggttcaactctggaccaggtg
cagctggaacagaatgaagctgccttcagtgttgcagtgtgtcgtttccccaacacagga
gatgattggtatgttctggtgggtgttgccagagacatgattctcaaccccagatcagtg
agcggcggctttatctacacctatcggctcatcagtggaggggagaaactggagttcgtg
cacaaaaccccagtagaggacgtgcctttggccattgctcctttccagggacgagtcctg
gtgggagttgggaaactgctgagaatctacgacctgggaaaaaagaagctacttcgcaag
tgtgaaaacaagcacgttcccaacctggtgactggcatctacacaattggccagcgtgtg
attgtgactgacgttcaggagagcttgttctgggttcgttaccgacgcaacgagaaccag
ctcatcatctttgccgatgacacatatccccgctgggtgaccacggcctgtctgctcgac
tacgacaccatggcctctgctgacaagtttgggaacatcagcattgtgcgtctacccccc
aacaccagcgatgatgtggatgaagaccccacagggaacaaagctttatgggacagaggc
ctccttaatggagcatcacagaaggctgaggtgataatgaactaccacgtaggagagacg
gtgttatccctccagaaaaccactctgatccctgggggttcagagtccatggtctacacc
actctgtctggaggcatcggcatactggtcccattcacctcgcatgaggaccatgacttc
ttccagcatttagagatgcatatgcgctctgagttccccccactgtgcggcagagaccat
ctcagctttagatcctactacttcccagtgaagaatgtgattgacggagatctctgtgag
cagtttaacagtatggaccctcacaagcagaaaagtgtggcggaagagctggacagaacg
ccacccgaggtctctaagaaactggaggacattcgcactcgctacgccttctag
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integrated database retrieval system
