Etheostoma spectabile (orangethroat darter): 116693658
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Entry
116693658 CDS
T08457
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116693658 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116693658 (srf)
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
116693658 (srf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
116693658
NCBI-ProteinID:
XP_032378680
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Position
8:complement(875376..911258)
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AA seq
600 aa
AA seq
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MLPSRAGSAPSGNGSPSGRGNTGHGSGLVGSGNRPVLVRAGLALPGVSESAGATGRQGQR
DAVGMLGANGPGGPRGARPGNGTGVTPLQTAVQGNMVGLNAGVVLPHGARFNPDRESAPI
CSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVTGQDVGIPPGGYGMVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDIKDTLKPTFTVASLPGSTSSAQCTVPTTSTTMQVSSGPSFPITNYLAPVSASGNIS
ANGTVLKTAGASGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQTLAAA
SQSQQGQQAVFRFPAAVSLTGAGVPQQLQAITVHHSTQSTSNSDSSLDICHTSTNSTATV
SLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPGMTDGGLAVLNAFSQGTSTMQVSHAQG
QDSGAVPQVFLTAPQGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSKSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccgggctggatcggcaccatctggaaacgggtcaccttcaggcagaggt
aacacaggacacgggtcggggcttgtcggtagcgggaaccgtcccgtgctggtcagagca
gggctagctttaccgggggtcagcgagagtgccggggctaccgggcgacaggggcaaaga
gacgccgtcgggatgctgggggctaatggtccagggggtccgagaggcgccagaccgggg
aacggaactggggttactcctctacagaccgccgtccagggcaacatggtggggctaaac
gcgggagttgtgttgcctcacggagctaggttcaacccggacagagaaagtgctcccata
tgcagcggctcggacaatgactctgactccggagatgatgacgaccccgtgggttcactc
ggggacagcaggagaggggtgaagcgggagagaggggagatggaagctgcggtgacgggg
caggacgtgggaatacctcccggaggttacggcatggtacccggaggggtcgccggggct
aagccagggaagaaaacacgtgggcgagtaaagataaagatggaatttattgacaacaag
ttgagacggtacaccactttcagcaagaggaagactggtattatgaagaaggcctatgaa
ctctccacgctgacggggacccaggttctgctgcttgtggccagtgaaacgggtcacgtc
tacacttttgccacccgcaaactccaacccatgattacaagtgaaacgggcaaagctctg
atccaaacatgcctcaactcgccggactcgccgccgcgctctgacccctccactgaccag
cgcatgagtgccacgggctttgaggagacagacctcacctatcaggtgtctgagtctgag
agcatgggcgacataaaggatacactgaaacccacgttcacggtagctagcctaccaggc
agcaccagcagcgcccagtgcaccgtccccaccacctccaccaccatgcaggtgagcagc
ggaccttcgtttcccatcaccaactacctggcgcccgtctcggccagcggcaacatcagt
gccaacggcaccgtcctcaagaccgccggcgcctcaggagtcatgcagctgcccgggggc
ttcactttcatgcccgcaggcactcctctcccccccggcacccccaccattcctctgagc
cagctgcagcagcactccctggccctgcaggggcagcatggtcagaccctggctgccgcc
tcgcagtcacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctcaca
ggagctggggttccccagcagctccaggctatcacggtacaccacagcacccagtccacc
tccaacagcgacagcagccttgacatctgccacacctccacaaactccaccgcaacggtg
agtctcccggcaaccatcgtcacctcgtcagtgccaacgtctgttgcgggtcacatgatg
taccccagcccgcacacagtgatgtacgcctccacgccggggatgactgacggggggctg
gctgtgctcaacgccttctcccagggcacgtcgaccatgcaggtgtcccacgcacagggc
caagactcaggtgccgtccctcaggtgttcctcacagcgcctcaaggcacggtgcagatc
cccgtctctgcggtgcagctacacccaatggtgattggccagcagtcgagcggcagcagc
agtaacctgacggagctccaggtggtcaacctagacgcagcacagaactcaaagagtgac
tga
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