Etheostoma spectabile (orangethroat darter): 116693666
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Entry
116693666 CDS
T08457
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116693666 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116693666 (exosc6)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116693666 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116693666
NCBI-ProteinID:
XP_032378694
LinkDB
All DBs
Position
8:complement(1178079..1179966)
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AA seq
274 aa
AA seq
DB search
MPTDTKRVRGPEVSQSTSLFLCKPAAVLPSQGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKLMCCIYGPRETERKDETDMKCGRLTTDMRFAPFSCLERGSWIQGSQDKDL
SLMLHESLQPAVCLNKYPRSQIEVNVMVLENSGSVLAHAVTCASLALADAGIEMFDLVLG
CSIRQDGASYVVDPSYMEENSCSSASSHNQGGLTVAFLPSLNQVSGLQSDGEMTEETLAA
GVRTCIEGCYKLYPVIQQALAKAVRRAAPPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgataccaaacgtgtacgtggcccagaagtatcccaaagtacgtctttgttt
ttgtgcaaacctgcggccgttctcccctcgcaaggccccagagcggacggtcggcagcgg
gatcaagtggacgtccggcctgtttttgtccggtgcgggctcgtgagccaggctaaaggc
tcggcttacatcgaagctggaaacaccaagttgatgtgctgcatttatggccccagagaa
acagagcggaaagatgagaccgatatgaaatgtggaaggttgactactgacatgcgtttt
gctccattttcctgtctggagaggggctcctggattcagggaagccaggacaaggacctc
tccctgatgctgcatgagagcctgcagccagccgtgtgcctcaacaaatatcctcgttct
cagatcgaggtcaacgtgatggttcttgagaatagcggttcagttttggcccatgcagtc
acatgcgcttctctcgccctcgcagatgcagggatcgaaatgtttgacctggtgcttggc
tgttccatacgccaggatggcgcctcttatgtggttgacccttcttacatggaggaaaac
agctgcagctcagccagcagccataaccagggcggtctgactgttgcgttcctccccagc
ctcaaccaggtttctgggctgcagtcagatggagaaatgactgaagagaccctggcagcc
ggtgttcggacctgcattgagggatgttataaactgtacccggtcatccaacaagccctg
gcgaaggctgtgcgcagggctgcgcccccaccatcagagagctga
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