Etheostoma spectabile (orangethroat darter): 116693695
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Entry
116693695 CDS
T08457
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116693695
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116693695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116693695
NCBI-ProteinID:
XP_032378742
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All DBs
Position
1:complement(8424563..8557500)
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AA seq
781 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKEESAEAHGTPQLPLHSL
LHGKAHPDEMQPLSSVPAESDWDSLVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDDPSCMEKLLSKDWKEKME
RLNTSELLAEVKGTPESLAEKEHQLSTMISQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAA
QQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMP
PLPQSLNTSGPISPSSLKNDKSSSSPITHVKEEGTQPLNLSARPKTTDMVKSPTSPTQNL
YLGSKSSPNSLLGKGGIPSPLGGGLGRGSSLDILSSLNSTALFGDQDTVLKAIQEARKMR
EQIQREQLQHHQQGMEAKLSALSSVGLNNCRVDKERAHFESIGHHLGKLGEEGKIGHRVI
DLTRPEDLDGGAGSTEARVFREARGRNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHN
SNISKILGSRWKSMTNQDKQPYYEEQARLSKQHLEKYPNYKYKPRPKRTCIIDGKKLRIG
EYKQMMRSRRQEMRQFFTVGQPPQIPITTSASMVYPGAITMATTTPSPQMTSECSSASAS
PEPSIPVIQSTYNMKLEPNTMANNSVPVNGEDEMDMYEDFEDEPKSDYSSENDTQEPVSA
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttcttcgtagcagctttttactgagcagagtcatgtcttccaagcaagcc
acgtctccttttgcctctgtggtcgatggggatgatgccatgagtcaggaacacttgtcc
tgggagaaagaggagagtgccgaggcccatggcacaccacaactgcccctgcacagcctg
ctccatggaaaagcccatccagatgaaatgcagccactcagcagtgtgccggcagagagc
gattgggacagcttggtgtcagcccaacagcgcatggaatctgacagcaataaagtatgt
tccctttactccttccggaacaattccacctccccacacaagccggaggagggggcccgg
gagcgaagtgacctgctgagcggatctgcgtttggaactccggagcggcgcaaaggaagc
ctggcagacgtagtggacacgctgaagcagaagaaactggaggagatgacaaagacagag
caagacgatccctcatgcatggagaaacttctttctaaagactggaaagaaaagatggag
aggctcaacaccagtgaactgctggcagaagtaaaaggtactccagagagcctagcagaa
aaggaacaccagctctccacaatgatcagccagctgatcagcctgcgcgagcagcttctg
gctgcccatgatgaacagaagaagctcgccgcctcacagatggagaaacagaggcagcaa
atggagttagctcgtcagcaacaggagcagattgcaagacaacagcagcagcttctgcag
cagcagcacaaaatcaacctcctccagcaacagatccagcaggtccagggtcacatgcct
ccgctcatgatccccatttttccacacgaccaacgcactctggcagcagcggcagccgcc
caacaaggatttctcttccctccaggaatgtcttataagccaggtgataactacccggtg
cagttcattccatccacaatggcagctgcagcagcgtcaggactcagccccctccagctt
cagcaactgtatgccgcccagcttgccagcatgcaggtctcacctggagccaagatgcct
ccactcccccagtccctcaatactagtgggcccatttctccctcttcgctgaagaatgac
aagagttcctccagccccatcactcacgtcaaggaggaaggaacacagccgctcaacctg
tctgctcggccaaagacgacggatatggtcaaatcacccacatcaccgacacaaaacctg
tacctcggcagtaaaagcagccctaacagtctccttggcaagggtggtatccccagccca
ctaggaggaggcctgggccggggctcatctctggatattctgtccagcctaaactctacc
gcgttgttcggggaccaggacacagtgttgaaggccatccaggaggcacggaaaatgagg
gagcagatccaaagggaacagctgcaacatcaccagcagggcatggaggcaaagctgtcc
gccctcagctcagtgggcctcaacaactgcagagttgacaaggagagggcgcattttgag
agcattgggcaccacctcggcaagttgggtgaggaaggaaagatcggccacagagttatt
gaccttaccaggccagaggatcttgatggaggcgcaggatctactgaggcgcgagtcttc
agggaagcccgaggaaggaacaacaacgagccccacattaaaaggccaatgaatgcattc
atggtgtgggccaaggatgagcgccgcaagatcctccaggccttccccgatatgcacaac
tctaacataagcaagattttgggttctcggtggaagtccatgactaaccaggacaagcag
ccatactatgaggagcaggcccgtctgagtaagcaacacctagagaagtacccaaactac
aagtacaagccacgacctaagagaacctgcattatcgacggaaaaaaactccgcattgga
gagtacaagcagatgatgcgctcacggcgacaagagatgagacagttcttcactgtggga
cagccaccacagatccccatcaccaccagcgccagtatggtctatcctggggccatcacc
atggcaaccaccacaccctcacctcagatgacatcagagtgctcgagtgcctcagcgagc
ccagagccatccattccggtcattcagagcacctacaacatgaagctagagcccaacacc
atggcaaacaacagtgtgccggtcaatggcgaggatgagatggacatgtacgaggatttt
gaggatgagcccaaatcagactatagtagtgaaaatgacacacaagagccagtcagcgcc
aactga
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