Etheostoma spectabile (orangethroat darter): 116693721
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Entry
116693721 CDS
T08457
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116693721 (rfwd3)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116693721 (rfwd3)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116693721 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
WD40
zf-C3HC4
zf-RING_UBOX
WD40_CDC20-Fz
WDR55
EIF3I
zf-rbx1
zf-C3HC4_2
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-ANAPC11
Rtf2
zf-RING_5
WD40_Prp19
Beta-prop_WDR3_2nd
zf-C3HC4_4
Beta-prop_WDR75_1st
zf-RING_Vps41
zf-RING_11
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_2
CFAP43_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
NSRP1_N
Beta-prop_WDR36-Utp21_2nd
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116693721
NCBI-ProteinID:
XP_032378817
LinkDB
All DBs
Position
8:19408556..19423264
Genome browser
AA seq
723 aa
AA seq
DB search
MEAMEVDSPGHLQGGGDRQPEVAAAAADANAPHVISDSGSSTEVDEDDEDDNERGQTAAR
VPPRLPATWAFSQRAVSGSAATPSAAHGAPIRRRLRQGLRVHYPSQTAAPSRGFPDFLLR
APAASVAQPESGSTTEVSESDEEEGEEGVNGEASAAAPEPVVPVPPASPRLHASVQHVQP
QDAGPTNSSSAADGERTEMSNQNVQPAPVASASAKPSQAEEGEGDICSICFEAWTTAGEH
RLSALRCGHLFGFTCIQRWLKAQGPAAKCPQCNKKAKRSDIVLLYAPKLRALDNSEQESL
KKSLEQEQSLRRKAELESAQYKLKLQVVTNKYGQAQQELQELRALMAQAGRSSVPSSSSS
TSSASTSLLLGLCQRADGSRTAQYSFSKAVLVSQAGSCRVLSYCEPLSCLLASQPSPHST
LVPGCGVKKVSVVNMKASQYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTV
VQTYNAGKPVWSCCWCLDNSNYVYAGLSNGSVLIYDTRDTSTHVQELQPLRSRCPVASLC
YVPRAASSSFPCGGLIAGSLEGGCFWEQVNETTYRPHVLPLETAGCTDIQVETESRHCLV
TYRPGRSNPSLRCVLMALNRTPQQDSSQLPSCSCAPVQTFSAGSSCKLLTKNAVFKRPDG
GGTLVCAGDEASNSTMVWDAGSGSLLQKLPADLPVLDISPFSVNGEHFLASLTEKMLKLY
RWE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtagactcccctgggcatctgcaggggggtggggacagacagcca
gaggttgcagctgcagcggcggacgccaacgcgccgcacgtcatctcggactccggcagc
agcaccgaggtggacgaggacgacgaggacgacaacgaaagagggcagacggcagcccgc
gtgccccccaggcttcctgccacctgggcgttcagtcagagggcggtgagcggctctgcg
gctacgccgtctgccgctcacggcgcaccgatccgcaggagactcaggcagggcctccgg
gtgcactaccccagccagaccgcggcgccctccagaggctttcccgacttcctgctccga
gcgccggctgccagcgtggctcagccagagtccggcagcaccaccgaggtcagcgagtct
gacgaggaggagggtgaggaaggggtcaacggagaagcctcggctgctgctccggagccc
gtcgtcccggtgccgcctgcgagtcctcgcctccacgcgtccgtccaacacgtacaacca
caggatgctggtccaaccaactccagttcagctgcagatggtgaaaggacagaaatgtcc
aatcagaacgtccagccggcccctgtggcctcggcttctgccaagccgtcgcaggccgaa
gagggcgaaggcgacatctgctccatctgcttcgaggcgtggacgacggcgggcgagcac
cgactgtcggcgctgcgctgcggacacctcttcggcttcacctgcatccagcgctggctg
aaggctcagggcccggccgccaagtgtccacagtgcaacaagaaagcgaagcgttcagac
atcgttctgctgtacgctccgaagctgagagcgctcgacaactccgagcaggagagctta
aagaagtctctggagcaggaacagtctctgaggaggaaggctgaactggaatcagctcag
tacaaactgaagctgcaggttgtcaccaacaaatacggacaagcacaacaagagctgcag
gagctgagggctctgatggctcaggctggccgaagctcagtgccgtcctcatcctcgtct
acctcctctgcgtccacctcgctcctcctcggcctgtgccagagggcggacggctccagg
acggcccagtacagtttctccaaagcggtgctggtgtcccaggctggaagctgcagggtt
ttatcctactgcgaacctctgagctgcctgctggcctcgcagccgtccccgcactccacc
ctggtgcctggttgcggggtgaagaaggtgagtgtggtcaacatgaaggcgagtcagtac
gttcccatccacagtaaacagatccgaggtttgtccttcaacagacagaacgacagtctg
ctgctgtctgccgctctggacaacaccatcaaactcaccagtctgctgaccaacacggtg
gttcagacctataacgcaggtaaacccgtgtggagctgctgctggtgtttagacaacagc
aactacgtctacgcaggtctgagcaacggctcggtgctcatctacgacaccagagacacc
agcacgcacgtccaggagctgcagccgctccgctccaggtgtccggtggcgtctctgtgc
tacgtcccgcgggcggcgtccagctccttcccttgtggcggtctgatcgcgggctctctg
gagggcggctgtttctgggagcaggtcaacgagaccacatacagaccgcatgtcctgccg
ctggagaccgccggctgcaccgacatccaggtggagacagagagccgacactgcctggtc
acctacaggccaggccgctccaacccgtccctgcgctgcgtcctgatggcgctgaacagg
acgcctcagcaggactccagtcagctgcccagctgctcctgcgctccggtgcagacgttc
agcgccggctcgtcctgcaagctgctcaccaagaacgccgttttcaagaggccggacgga
ggcgggacgctggtctgcgccggggacgaggcctccaactccaccatggtgtgggacgcc
ggcagcggctctctgctccagaagcttccggccgacctcccggtgttggacatcagcccg
ttctcggtgaacggcgagcacttcctggcctcgctcaccgagaagatgctgaagctctac
aggtgggagtga
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integrated database retrieval system
