Etheostoma spectabile (orangethroat darter): 116693845
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Entry
116693845 CDS
T08457
Symbol
polr3b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03020
RNA polymerase
esp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116693845 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116693845 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116693845 (polr3b)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116693845 (polr3b)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116693845 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
116693845
NCBI-ProteinID:
XP_032378935
LinkDB
All DBs
Position
8:complement(12136803..12163136)
Genome browser
AA seq
1126 aa
AA seq
DB search
MEVLGGEFCDMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEVSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNRVDDRDYYGNKR
LELAGQLLLCCLKTVLKILTELKKILTNIPNKTSFVGKHTRINHQRRQCLSPGNWSLKRF
KMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEA
CGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVI
RDHPKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKRGQPMVKNK
HMEDLSQGYRTFEDFLHEGLVEYLDVNEENDCHIALYEHMISKDTTHLEIEPFTLLGVCA
GLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELID
FEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRRYTNQTFDK
VMGPMLDAVTRKPIWRHSILDADGICSPGEKVENKQVLVNKSMPTVTQTPLEGSTLPGQP
QYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRHGQKGVCVX
SLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGS
KVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGP
RAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLG
YSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacttggaggagagttttgtgacatgactcctcaggagctggcagctcctgtc
aacactgtagcggaaaaatggaaactgttaccagccttcctgaaggtgaaaggattggta
aagcagcacattgactccttcaactatttcatcaatgtggagattaagaaaataatgaaa
gcaaacgagaagatcacaagtgatgctgatccaatgtggtacctcaaatacctcaatatt
tacgttggcatgcctgatgttgaagaaagcttcaacgtaaccagaccagtgtctcctcat
gagtgtcgtctcagagacatgacatactcggctcccatcacagtggacattgagtacacc
cgtggcagtcagagaatcatccgcaatgcactgcccatcggaaggatgccaatcatgctg
cgaagctcaaactgtgttctcactggaaagacgcccatggaggtttctaaactcaatgaa
tgtcctctggatccagggggttatttcattgtgaaaggtcaggaaaaagttattctgatc
caagagcagctgtccaagaatcgaatcattgtggagcaggacaggaagggagcagtcgga
gcctcggttaccagctccactcatgagaagaaaagcagaactaatatgattgtcaaacaa
ggcagattctacctaaagcacaacacgctgtcagaggatgccccaattgccatcatattc
aagggtatgggtgtagagagtgaccaggagatagtgcagatgatcggtacagaggagcac
gtcatggccagcttcgccccgagcctggaggaatgtcagaaggcccagatcttcacacag
actcaggctctgaggtaccttgggaataaagtgcgaagacagcgcatgtggggaggcccc
aagaagaccaagatggaggaggccagagagcttttggcatctcttatcctcacacatgtg
ccggtcaaagagtttaactttcgggctaagtgtatctacctggctgtgatggttcgtagg
gtgatcctagctcagggggacaacagggtggacgatagagattactatggcaacaaacgt
ctggagttggctggacagctccttctctgctgtttgaagactgttttaaaaattttaact
gaactaaaaaaaatcctgaccaatatcccaaacaaaacgtcatttgttggtaagcacacc
aggatcaatcaccaacgcaggcaatgcctatccccgggcaactggtctctgaagagattc
aagatggatcgtcagggtgtcacccaggttctgtctcgtctctcctttatttcggctctt
ggcatgatgaccaggatctcctcccagtttgagaagaccaggaaagtcagcgggccgcgc
tcccttcagccatcacagtggggcatgctgtgtccgtctgacacccctgagggagaggct
tgtggtctggtgaagaacttggctctgatgacccacatcaccaccgacatggaggacggt
ccgatcatcaaactggccttcaatctgggagttgaagacgttaacctgctgtgtggagag
gagctctcatacccaagcgtcttcctcgtcttcctcaatggtaacattctcggtgtgatt
cgagatcatcccaaactggtcagcaccttcagactgatgcgcagggcaggtttcatcaat
gagtttgtgtccatctccaccaacttgaccgaccgctgcgtctacatctcttctgatgga
ggacggctctgcaggccgtacatcatagttaagaggggacagcccatggtgaaaaacaaa
cacatggaagatctgtcacagggctacagaacttttgaagactttctgcacgagggcctg
gtggagtacctggatgtcaatgaagagaatgactgtcacatcgctctttatgaacacatg
attagcaaagacacaacacacttggagatcgagcccttcactctgctcggggtgtgcgct
ggcctcattccttacccccaccacaaccagtcacccagaaacacataccagtgtgctatg
ggcaagcaggccatgggtactattggctacaatcagaggaaccgtatcgacactctgatg
tacttgctcgcataccctcagaaacccatggtcaaaaccaaaaccatcgagctgattgac
tttgagaagctgcccgctggtcagaacgccaccgtggccgtgatgagctacagtggctac
gacattgaggacgctctgatcctcaacaaagcctcgcttgacagaggatttggccggtgc
cttgtctataaaaatgccaagtgcacgctccggcgttacaccaaccagacctttgacaag
gtaatggggcccatgctggatgctgtcacacgaaagcccatctggaggcacagcatcctg
gatgctgatggcatctgctcccccggtgagaaagtagagaacaagcaggtgttggtgaac
aagtccatgccgactgtcacccaaacaccactggagggcagtaccctgccaggccagccc
cagtacagagacgtgcccatcagctataagggctcaacagactcatacattgagaaggtt
atgatctcatccaacgctgaagatgctttcctcatcaagatcctcttaaggcagaccagg
agaccagagatcggagacaagttcagcagtcggcacggacagaaaggtgtttgtgtgtga
tctctcatcgttccacaggaggacatgccgttctgtgacacaggcatttgtccagatatt
atcatgaaccctcacgggtatccatcgagaatgacggtgggaaagttgattgaactgctg
gctgggaaggccggagttctggacggacggtttcactatggtacggccttcggaggcagc
aaggtgaaggatgtatgtgaggatctcattcgctatggatacaactaccagggcaaggac
tacgtcacctcaggaatcactggggaacctctggaggcttatatctactttggaccggtg
tattatcagaaactgaagcatatggtgctcgacaaaatgcatgcgagagcccgaggaccc
agagctgttctcaccagacagcctacggagggtcgctccagagatggaggtctgcgtctg
ggcgagatggaacgtgactgtctgattggctacggagcaagcatgttgctcctggagcgc
ctcatgatctccagtgacgcctttgaggtggacgtgtgcgggcagtgtggcctgttggga
tactctgggtggtgtcactactgtaagtcttcctgtcacgtttcctccctgcgtatcccg
tatgcttgcaagttgctgttccaggagctgcagtccatgaacatcatcccccgacttaaa
ctgtcgcgctacaacgagtga
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