Etheostoma spectabile (orangethroat darter): 116693846
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Entry
116693846 CDS
T08457
Symbol
ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116693846 (ppfibp1)
Membrane trafficking [BR:
esp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116693846 (ppfibp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
116693846
NCBI-ProteinID:
XP_032378936
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All DBs
Position
8:complement(12169096..12194558)
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AA seq
991 aa
AA seq
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MMADASDMLAAALEQMDGIIAGSKALDYSNGLYDCQSPTSPFMGNLRALHLLEDLRSVLE
LMDTEERESLRCQIPDSTADSLVEWLHGHLSNGHISLSGGDHYQERLSRIESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLDDHREKLNATEEMLQQELLCRSALETQKHELISEVSNL
KLKLNTMEKDRLDFDDRFRDSEDLILEINELRYRLTELESDKLQYEKKLKSTKLLMAKLS
SLKIKMGQMQYEKQRKEHKLQAMKEELAILRRQLEGTDGEMRRLQDETGFKAIASSSSDP
TERVSHPDETLRKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELKQSLLRYKKVQNMV
MSVQGKKEKSRENEYVESNSDGSIPFFSANPVCAESEKYEVPDVEQLKRRSPDEESLNGL
SEEPSPTPSPSDPERIPAPTPTDVESSQDATSQNQLDKSNNEKNTSKEISKISDKPPMSS
SATLPATTEDDSFGSRKARSSFGKGFFKIRGGKKTASTPNLDRSRSASAPMLAETERQGT
DHLDLAGLPQRSANSDSTHTLPTTPEGRKKSKGIKKLFGKLKRSQSTTFNLDDNPPEGEF
KRGGVRATAGPRLGWSRDLQRTNNDVDAPFARWSKDQVCDWLQGQGLGLYVNMARVWISS
GQTLLQASQQDLERELGVKHPLHRKKLQLALQALGSEEDNSKGKLDYNWVTRWLDDIGLP
QYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPS
DENNISPAEISQWTNHRVMEWLRSADLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLN
IPPNKTLLRRHLATHFNLLIGSEAQQLKQECLENPDYTLLTATTKVKPRKLSFGNFGSLR
KKKQDESEEYVCPMDVEMPKGRSFQKGFELQIYEDDLDRLEQMEDSEGTVRQIGAFSEGI
QNLTSMLKDDEFFKEASNSPNPSVTDEDSNA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgccagcgacatgttggcagccgccctggagcagatggatggcattata
gcaggctccaaggctctggactactccaatgggctgtatgactgccagtcacccacctct
cctttcatgggcaacctgcgggcgcttcaccttttggaagacctgaggagcgtcctggag
ttgatggacacagaggaaagggagagtctacgctgccagatccctgactccacagctgac
agtctggttgagtggctccatggtcacctgtccaacgggcacatctctctgagtgggggt
gaccactaccaggaaagactttcccgaatagaaagtgataaggagtctctggttcttcag
gtgagcgtgctgacagaccaggtggaggctcagggagaaaagattcgggatctggacttg
tgtttggacgatcacagagagaaactcaacgccaccgaagagatgctacagcaggagctt
ctgtgcagatctgcactggagacccagaagcatgagctaatatctgaagtgtccaaccta
aaactgaagctgaataccatggagaaggacagacttgactttgatgacagatttagggac
agtgaggatttgattcttgaaattaacgaactgcggtacagactgacggagctggagagt
gataaactacagtatgaaaagaaactgaaatccacaaagttgctaatggccaagctttct
agcctgaaaatcaaaatgggccagatgcagtatgagaaacagaggaaggagcacaaactc
caggctatgaaggaggagctagccatactgaggaggcagctggagggcaccgacggagag
atgaggagactacaggacgagacgggcttcaaagccatcgcctcgagcagttcagatccc
acagagagagtttctcatccagatgaaacacttagaaagaggctcaaagaaaaacatgtg
gaagtgcaaagaatgaaaaaggcagttgaatcgttgatggcagccaatgaagagaaggat
cgtaagattgaggaactaaagcagtcgctgctgcgatataagaaagttcaaaacatggtg
atgtcagtgcaagggaagaaagaaaaaagcagagaaaacgagtacgtcgagagtaatagt
gatggctccatcccattcttctcagccaacccagtgtgtgcggagtcagaaaagtatgaa
gttccagatgttgaacaactgaaaaggaggagcccagatgaggagagcctcaatggactg
agtgaagagccctcacctacacccagcccttcagatccagaacgaataccagcgcctaca
ccaacagatgttgaaagcagccaagatgccacaagccagaaccagctggataagagcaat
aatgaaaagaatacgagcaaagagatcagtaagatcagtgacaagccgcctatgagttcc
tctgccaccttgcccgccaccacagaggacgacagctttggctcgagaaaggctcgttca
tcctttggaaagggcttcttcaagatccgtgggggcaagaagacggccagtacccctaac
cttgaccgcagccggagtgcaagtgcgcctatgctagctgaaacggagcgacaggggact
gaccatctggatctggccgggctgccacagagatcggccaacagcgacagcacccacaca
ctccctacgaccccagagggcaggaaaaaatccaaaggaataaagaaactctttgggaag
cttaaaagaagtcagtctaccacatttaacctggatgacaacccaccagagggtgagttc
aagaggggcggagtgcgagccacagcgggacccagactgggttggtctcgtgacctccaa
agaaccaacaatgatgttgacgctccctttgcacgctggtcaaaggatcaggtgtgtgac
tggctgcaggggcagggtctcggtctttatgtgaacatggcccgtgtgtggatctcctct
ggacagactctgctacaggcctcccaacaggacctggagagggagctgggcgtcaaacac
ccgctccacagaaagaagctgcagctggccctgcaggccctcggctcagaggaggacaat
agtaagggaaagctggactacaactgggtgacaagatggctggatgacatcggtctgcct
cagtataagacccagtttgatgagggtagggtggatggccgcatgctgcactacatgaca
gtggatgacctgctttccctgaaagtagggagtgtcctgcatcacctcagtatcaagaga
gctatccaagtgctccgactcaacaactatgagcccaactgcttgcgtcgtaggccatct
gatgagaacaatatttctccagcagagatttcccagtggaccaaccatagggtgatggag
tggctgcgttctgcggacctcgccgaatacgctcccaacctaagaggcagcggtgtgcac
ggaggcctgatggtcttagagccacggttcaatgtggagaccatggctttgctgctcaac
atcccccccaacaagacgctgctgcgccgccacctcgccacacatttcaacctgctcatt
ggctcggaggcccagcagctcaaacaggagtgtcttgaaaacccagactacactctgctt
actgccaccactaaggtcaagccaaggaaactgtcatttggtaactttggcagtctgagg
aagaaaaagcaggacgagagcgaggagtacgtgtgtccgatggatgtggagatgccaaag
ggacgaagctttcagaaaggcttcgagctccaaatctacgaggatgacctcgacaggctg
gaacagatggaagactctgagggaactgtgcgacagatcggagctttctctgagggtatt
caaaacctgacgagcatgctgaaggatgatgaattttttaaagaggcttcaaattcacca
aaccccagtgtaacagatgaggactccaatgcatga
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