Etheostoma spectabile (orangethroat darter): 116693854
Help
Entry
116693854 CDS
T08457
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116693854 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116693854 (myo5c)
04131 Membrane trafficking [BR:
esp04131
]
116693854 (myo5c)
03029 Mitochondrial biogenesis [BR:
esp03029
]
116693854 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116693854 (myo5c)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116693854 (myo5c)
mRNA cycle factors
P-body specific factors
116693854 (myo5c)
Membrane trafficking [BR:
esp04131
]
Others
Actin-binding proteins
Myosins
116693854 (myo5c)
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116693854 (myo5c)
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116693854 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
nSTAND3
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
116693854
NCBI-ProteinID:
XP_032378965
LinkDB
All DBs
Position
8:6057653..6068409
Genome browser
AA seq
1741 aa
AA seq
DB search
MALLDLYTEYNRVWIPDAEHVWKSAEIMRDFHFGNNVLELLLEDGTEHCYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVDSKIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLQEFQNLRLLGADKFQYTCMGGEITIEGVD
DEKDMEETRRTFSLLGLKDDFQSDVFQVLAAILHLGNVEIRNSGDGKSSIPPGDPHLSVF
CELLGASADGLGRWLCHRRIVLVAETVVKPVPKERAVNARDALAKQIYAHLFDCIINRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRVSKFPFLANLFQEEKSAVTT
KGVKVRPARPAVKPTNKQLRTSVGDKFCSSLALLMETLNATTPHYVRCIKPNDEKLPFEY
DSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEEDLSDKKQTCKNVL
QRLIQDPDQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKFLRMRD
AAIILQQYIRGKRTIRKTVSAATLKQGWAAMVVQRYWRGYRMRQIFQLVRLASITIQAFT
RGWMARKRYKKMVKEQKALILQKYARAWLARRRFQTMRRLVLNVQLSFRVQQLRKKIEEQ
NKENRGLMERLTSLANSHSQTVDRLQGLEAQLEKSTNRNASLEAREKKAKEDACLTTAQL
QKEIDALNFEKLNLEKKFEASTKEAKESFDQIKRNLLEEKEYEARLRKIAENNIEIQRQD
HEKLVETLKEEIKRLKEERVSLQRKMEDGGQVNSDLQEQVIQLTKHVKAIPELRRELNNL
QNQRNNMDRQMKQQSEQARAKMKDITRQLLGGVVEEEVLLGLTPNDSEKIYEVEDLLAAF
DGLQKATRILENHQREQKERYETQVEGLKLKVDHLQNENSKLQNLFQEKSNVNENIRQEV
SRLSSENSVLPELKLQVSELQRQKQELEAYIAEQSRELAEKTEEITNILQRKIKEESSRR
SHFEEKAEELEELKRQLQDRVEELEEENDHSKRQLLIETEAKNKLRQENSQLTAENMDFE
EQLDQKDRLIKKLQNQIKSLETSQKAKQTSAPAMPKDYLGMLEYKREDESRLIQNIILDL
KPKGVVVSVIPAMPAYVLFMCVRHADYLNDEVRLKSLMTAIIGAVKKVITSHHKDFEMLS
FWLSNTYQLLNCLKQYSGEEEFLKQNTPRQKKNCLQNFDLSEHRQILSDLAIQIYYRFLS
AIEKTLTPAIVPGMLEHESLQGISSMKPSGFRKRSNSIYEDSETYTISSILQQLSIFHST
MSQHGMEQGLIQQAFKQMFFLIGATTFNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEKE
LQSSNAIDTLRPLSQAAWLLQVNKSTDEDAKEIAEKCPELNPVQIVKILNSYTPIDDFEK
RVASSFVRKVQSLLQDRDGSTQLMLDLDYRFQVTFPFCPSSQALELLQVPSSLHLDFLTR
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggatctgtacaccgagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgagattatgagagactttcattttgggaataatgttcttgaattg
cttcttgaagatggcactgagcactgctaccctgttgacccgtcaaaaccacaactccct
ccacttcgcaacccggacatcttggtgggggagaacgacctcaccgctctcagctacctg
catgaacctgcagtcctgcataatcttaaagtgcgatttgtggattccaaaatcatctac
acctactgtggcattatactggtagctgtaaatccatacaaacagcttcatatctatgga
gatgcaatcattcatgcatactcaggccagaacatgggagacatggaccctcacatattt
gcagtggctgaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatc
gtcagtggtgaatctggagccggcaaaacagtgtctgcccgatacgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagttgaagacaaagtcctggcatccaat
ccaataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgtttt
gggaaatacacagagatcagctttgacaggaggtaccggatcatcggagcgaacatgagg
acctatctcttagagaaatccagagttgtttttcaggcagacaatgagcgaaactatcac
atattctaccagatgtgttcctgtgctcatctgcaagagttccagaatctaagactgttg
ggtgcagataagttccagtacacctgcatgggcggtgagatcactattgaaggcgtagat
gacgagaaagacatggaggagactagacggaccttctcgctgctagggttgaaggacgac
tttcagtcagatgtgttccaagttttggcagccattctgcatttgggaaatgtggaaatc
cgaaactccggagatggcaaatcatcaattcctcccggtgatccacacctgtcagtcttc
tgtgagttgctgggtgcgagcgcagacgggttgggccgttggctctgccatcggaggatt
gttctggtagctgagacggtggtgaagccggtgcccaaagagcgggccgtaaatgccaga
gatgccctagccaagcagatctatgcccatctgtttgactgtattattaacaggataaac
acagcacttcaggttccaggaaagcaacacgctttcattggtgttctggacatttatggc
tttgaaacgtttgacatcaacagctttgaacaattttgcatcaactatgcgaatgaaaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacattgatagatttctatgacaaccagccagtcattgacctgattgaa
gcaaaaatggggatcctggacttgcttgacgaagaatgtttgtttcctcagggcactgat
caaagctggttgcaaaagctgttcaactatcttgatgccaatcctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggttgaatatcaatgc
agaggttttcttgaaaagaacagagacactctctatgaagaactggttgacattatgaga
gtcagtaagtttccttttctggccaaccttttccaagaggagaaaagcgctgtgaccact
aaaggtgtcaaagtgaggcccgctagacctgcagtgaaaccaaccaataaacagctgaga
acctcagtgggagataagttctgcagctccctcgctctactgatggaaacactgaatgct
accacccctcactatgtacgctgcattaagcccaatgatgaaaagctcccatttgaatat
gattccaggagggtggtgcagcagctgcgagcctgtggagtccttgaaactattcgtatc
agtgcacagagctatccgtccaggtggacatacattgagttttacagccgatacagtatc
ctaatgtcacaccaggaagaagacctcagtgacaagaaacagacctgcaagaatgtgctg
cagaggttgattcaggaccccgaccagtacaagtttggtcggactaagatcttcttccga
gctggtcaggtagcttatctcgagaagctgcgtctggaccgactgagaggagcctgtgtg
accatccagaaacacgtgcgcgggtggagccagaggaggaagttcctgcgcatgagagac
gcagccatcatcctccaacagtacatccgcggaaagaggacaatccgtaaaacagtgagt
gctgcaacactgaagcagggctgggcggcaatggtggtccagagatactggagaggttac
cgcatgagacagatcttccagttagttcgtctggcctccatcaccatccaggccttcaca
cgaggttggatggcccgtaaacggtacaagaagatggtaaaggagcagaaagccctgatt
ctacagaagtatgccagagcatggctggcacggcggcgttttcaaaccatgcgtcggctg
gtgctcaatgtacagctctccttcagggtgcagcagctcagaaagaagatcgaagagcag
aacaaagagaatcgtggattaatggaaagactgaccagcttggccaactcacactctcaa
accgtggacagacttcagggtttggaggcacagctggaaaaatcaaccaaccggaacgcg
tctttggaggcaagagagaagaaagcgaaagaagatgcttgcctgacaactgcacagctt
caaaaggaaatagatgcactgaactttgaaaagctgaacttggagaaaaagtttgaagct
tcaaccaaagaggccaaagaaagctttgatcaaataaagaggaaccttctggaagaaaaa
gaatatgaagccaggcttagaaaaattgcagagaacaacattgagatccagagacaggat
catgagaagttggtggaaactctaaaagaggagattaagagattgaaggaggagagagtc
agtctgcagagaaagatggaggacgggggccaggtgaactctgacctgcaggaacaggtc
atccagctcaccaaacatgtcaaggccattcctgagctacgcagggaactcaacaacctg
caaaaccagagaaataacatggaccgacagatgaagcaacagtcggaacaagcaagagct
aaaatgaaggatattacgagacaacttcttggtggcgttgttgaagaggaggttcttttg
gggcttactccaaacgactctgagaagatttatgaagttgaagatttgctggcagccttt
gatggcctacagaaagctaccagaatcctggaaaaccaccagagagagcagaaggagcgc
tatgagacccaagtggagggtttgaaactgaaagtggatcaccttcaaaatgagaacagc
aagttacaaaacctgttccaagagaaaagtaatgtcaatgagaatattcgccaagaagtg
tccaggctcagcagcgagaactcagttttaccggagctgaaactgcaggtctcagagctg
cagagacaaaaacaagaactggaggcttacatagcggagcagagcagagaactagcagaa
aaaactgaggagatcactaacattcttcaaagaaagattaaagaagagagctcacgacgc
agtcactttgaggagaaagctgaagagctggaggagttgaagcggcagcttcaagacaga
gtagaggagcttgaagaggagaatgatcactcgaaaagacagctgctgattgagactgag
gccaagaacaaactgagacaggagaattcacaattaactgctgaaaatatggactttgaa
gagcagcttgaccagaaagatagattaataaagaaactccagaatcaaataaagagcctt
gaaacatcacagaaagcaaagcaaacgtctgcgccagccatgcccaaagattaccttggc
atgttagagtacaagagggaggatgaatccaggctcattcaaaacatcattctggaccta
aagcccaaaggcgtagtggtcagtgtgatccccgcgatgccagcttatgtcctcttcatg
tgtgtccgccacgctgactacctaaacgatgaagtcagactcaagtctttaatgaccgcg
atcattggtgctgtcaaaaaggtcatcacgagtcaccacaaagactttgagatgctgtca
ttctggctctcaaacacgtatcagctgctcaactgtctgaagcagtacagcggggaggag
gagttcctgaaacaaaatactcctcgccaaaaaaagaactgcttgcagaattttgatttg
tctgaacacagacagattctcagcgacctggccattcaaatctactatcggtttctctcg
gccattgaaaagaccctcactcctgcaattgtacccggtatgttggagcacgagagttta
caggggatttctagcatgaagccgtcgggcttcaggaagcgttctaacagcatctacgag
gactcagagacatacaccatctcctccatccttcagcagctcagtatctttcattccacc
atgagccaacatggcatggagcagggcctcatccaacaggctttcaagcaaatgtttttc
ctaattggtgcgaccaccttcaacaacatcatgctccgcaaagatatgtgctcctgcagg
aagggaatgcaaatcaggtgtaacatcagttacctggaggaatggctgaaggagaaggaa
ctgcaaagctccaatgctatagacactctgaggccattgtctcaggctgcctggttactg
caagtcaacaagtccactgatgaagacgccaaggagatcgctgaaaaatgccctgaactc
aaccccgttcagattgtcaagattctgaactcctacactcccattgatgattttgaaaaa
agggtggcatcatcatttgtccgcaaagttcagtcgttactacaagatcgtgacgggtcc
acgcagttgatgctggacttagactatcgtttccaggtcacgtttcctttctgcccatcc
tcgcaggctctggagctgctgcaggtcccgagcagccttcatctggatttcctgaccagg
atctga
DBGET
integrated database retrieval system
