Etheostoma spectabile (orangethroat darter): 116694089
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Entry
116694089 CDS
T08457
Name
(RefSeq) contactin-1a-like isoform X1
KO
K06759
contactin 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116694089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116694089
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
esp00537
]
116694089
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
Contactins
116694089
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
esp00537
]
Others
116694089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Ig_4
C2-set_2
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
116694089
NCBI-ProteinID:
XP_032379449
LinkDB
All DBs
Position
8:complement(3835195..3913910)
Genome browser
AA seq
1055 aa
AA seq
DB search
MLKGQQLKACWGKPGNSANVPSVELLAVTPAGGPHFNIMLHLTLFLLVLSLSPAEPSMHG
EVPDFYEDEATGYGPVFEEQPVDTIYPEESPEAKITMSCRARANPPATYKWIMEDMEIDL
NAHQSHYSLVGGNLVISNPIKTKHVGQYSCLATNMYGTVISREASVQFGYLDLFSSEERE
SVYVKEGQGAVLLCASPPHYPAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSS
DSGNYSCIASSQSISKSVFSNYIPLVPLAERPIRKYPADLKVKFPDTTALVGQNITLECF
ALGNPVPEIRWKKLDGQLPPNHEVRMAGAHLHLYNVQFEDEGSYQCEAVNSRGKDYHAAR
VSVEAFPEWVEHISSTEKDLSSSYTMSCIASGKPEPRIRWLKNGELSDRKEMRFSSLTFD
DSGMYQCIAENHHGVIYANAELRVYACAPTFEHNPVKRVLAPKNGRVVIQCRPKAAPKPN
FSWSKDTELLYNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVTEST
KITMAPSNTDVKVGEDTRMQCAASHDSSLDITFIWSLDGRVIDLHKDSQHYERTLNGSSN
GELLIKNLQLKHAGRYTCTAQTPIDNVTASAHLVVRGPPGAPGGVRVMNKTDKTVTLQWS
RGADNHNPISKYTIQYRDSFSKEVWKNATTSPTDVEGNTEMATVVDLFPWTEYEFRVIAT
SALGTGEPSSPSPKDKTLEAIPVVAPSDVGGGGGSSRELTITWTPVQPQYYYGPNFGYIV
AFKPQDGHEWSKVTVADPQAKRYVHKDPSIPPSTEFHVKVKAFNSKGEGPFSLTAIIYSA
QDAPSEAPVSVDGRALSATEAIVWWLPLSQSNIDGYQVKYWRNQEDSEGRAQRVVVPGSE
NHTRLESMKPDSHYLIEVRGYNSAGFGPASEHLQIYTKKAPPSRPPRIAGKKLKGRKVNI
VWEHVEPLANESPVDGYKVLCRQQGHSTGTLYTTSKQSIDLLLPTDGNYVVEVRAHTEGG
DGAVAQVNITGGSVLCAPSLNVLSLLLVALLCLNL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagggacagcagctcaaggcgtgttggggaaaaccaggcaattctgctaatgtt
ccatcagttgagcttctagctgtaaccccagcaggtggtcctcacttcaacatcatgctg
cacctcaccctgttcctcctggtcctctctctctcccctgcagagccatcaatgcatggg
gaagtacctgacttttatgaagacgaagccacaggttacgggccggtgtttgaggagcag
ccggtggataccatctaccccgaggaatcacccgaggcaaaaatcaccatgagctgcagg
gctcgagccaatccacctgccacatacaagtggataatggaagacatggaaattgacttg
aatgcacatcaaagccactacagtttagtaggaggcaacttggtgatcagtaaccccatt
aaaaccaagcatgtaggacagtactcctgtttggctaccaacatgtatggcacagtcatc
agccgagaggcctcagtccagtttggatatctcgatcttttctcgtctgaggagagggag
tcggtgtacgtaaaagaaggacagggggctgtgctgctctgcgcttccccacctcactat
ccagccgagctgtcattccgatggatcctcaacgaattccctaccttcatcccactggac
aagaggcgttttgtctcccagataacgggtaatctctatatctccaaggtggactcctcc
gacagcggcaactactcttgcattgcgtccagccaatccatttccaagagcgttttctcc
aactacatccccctcgtacctctggctgaacgtcccatccggaaataccctgctgacctc
aaagtcaagttcccagataccactgctctggtggggcagaatatcaccttggaatgcttc
gctttgggaaaccccgttcctgagatccgctggaagaagttagatggacagctgccaccc
aatcatgaggtgaggatggcgggggctcatctgcatctgtacaatgtgcagtttgaagac
gaaggcagctatcagtgtgaggcagtgaactcgagaggaaaggactaccacgctgcacgt
gtgtctgtagaagcttttcctgagtgggtggagcacatcagcagcacagagaaagacctc
agcagcagttacaccatgtcctgcatagccagtggcaaaccagaaccacgcattcgctgg
ctgaaaaatggagaactgtctgataggaaagagatgaggttcagcagcttgacgtttgac
gattcagggatgtaccagtgcattgcagagaatcaccacggagtcatatatgccaatgca
gaactgcgtgtttatgcctgtgctcccacatttgaacacaacccagtaaagagagtcctg
gcacctaaaaacggccgggtggtgatccaatgtcgacccaaagcagctccaaagcccaac
ttctcctggagcaaagacaccgagctgctttacaactccaccagggtgtttatctgggag
gatgggagcctggagatcctcaatgtgacgcgagcagatgaaggcaggtacacctgcttc
gctgagaatgaccggggcaaggccaacagcacgggctctctgttggttacagagtccaca
aagatcaccatggcaccgtccaacactgacgttaaagtgggtgaggacaccaggatgcag
tgtgctgcgtcccatgacagttcattggacatcaccttcatctggtccctggatggccgg
gtcattgacctgcacaaggacagtcaacattatgaacgcaccctgaatggaagttcaaat
ggcgagctactgattaagaacctccaactgaagcatgccggacgctacacctgcactgca
cagacccccattgacaatgtcactgcttctgcccaccttgttgtcaggggtccccctggt
gccccaggtggggtgcgagtaatgaacaaaactgacaagactgtaacattgcagtggagc
cggggagcagacaaccacaaccccatctccaaatataccatccagtacagagactccttc
tcaaaggaagtctggaagaatgccactacatctcctacagatgtagaggggaatacagag
atggccacagtggtggatttgttcccctggacagaatatgagttcagagttattgccact
agcgctctggggacaggagagccgagcagcccgtcacctaaagacaaaaccctggaagca
attcctgtggtggctccctcagacgtcggcggtggtggagggagtagcagagaactaacc
atcacatggacgcctgtacagccacagtactactatgggcctaattttggctacattgtg
gccttcaaaccacaagatggacacgagtggagtaaggtgacggttgctgacccgcaggcc
aagcgttatgtccacaaagacccctccatccctccatcaacagagtttcatgtcaaagtc
aaagccttcaacagcaaaggagagggaccctttagcctaacagctatcatttattctgca
caggacgctccatctgaagctcctgtaagtgttgacggcagagctctctctgccacagaa
gccatagtttggtggttgcctctctcacagagcaatatcgatggataccaggtgaagtac
tggaggaatcaggaagacagtgaggggcgggcccagagggtagtggtacccggcagtgag
aaccacaccaggctggagagtatgaagcctgactcccactatcttattgaggttcggggc
tacaactctgcaggatttgggccggccagcgagcatctccagatctacaccaagaaagcc
cctccaagtcgacctcccagaatagctgggaaaaaattaaagggccggaaagtaaatatt
gtctgggaacatgtggaaccacttgctaacgagtcaccggtggatggttacaaagtgctg
tgcaggcagcagggccactccacaggcactctgtacacaaccagtaagcagagcatagac
cttctcctgcccacagatgggaactacgtggtggaggtccgggcgcacacagagggcgga
gatggggctgtggcacaagtcaacatcacaggtggaagtgtcctatgtgccccgtctctc
aacgtactctccctgctcctggtggctctcctctgcctgaacctctga
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