Etheostoma spectabile (orangethroat darter): 116694226
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Entry
116694226 CDS
T08457
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116694226
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
116694226
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
116694226
NCBI-ProteinID:
XP_032379712
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Position
8:complement(5679128..5693534)
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AA seq
1187 aa
AA seq
DB search
MEKFQSSMRKRLYSLPQNIGQKSFVMDEGDNGDKDTKRKSIRLKHLSSPSPARSIEEARS
EDLGRDVIVKTNLNGDCRLFRGSISSITGRHPPGSDPAEQRRLIPEADVSESYPDEHSPG
AQQWESAGLTGPAEQESMFDQSSFIKLEGTEQIISEDDRLYQAGFMHRQFGAMLQPGVNK
FSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFK
DEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPHQIKVKYLKSWFVVDFIS
SIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEVFHMT
YDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVTRNKMVNDTWGQQYSYA
LFKAMSHMLCIGYGLYPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPADMRQRIHEYYEHRYQGKMFDEENILEELNEPLREEIINFNCRK
LVASMPLFANADPNFVTSMLTKLRFEVFQPSDYIIREGTIGKKMYFIQHGVVSVITQKNS
QDTKLSDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDNFNEVLEEYPMMRRAFETVA
LDRLDRIGKRNSVLQNKVQHHQSSGILNFQESEIIQRIVQHDRDMAHCTQLIQTSPKSLH
LPPAPPSPTPVIWAPLVQAPLQAAAATTPLALALAHHSKLPSILFHHPLAAGPLKDPISH
PKRVHVGANASSSCGSGPSSPANSSHFRSGIETPTLTSLRAPHLATGPASATLTSQPVFT
SNLQPLAPLPSHQLSHHPPHSGIASVFPINQSTVSYTCSAQLHPQPFHGAMTTPPHPIGL
LQQGAPVRLTGRFPAPSASTINPLISSSVGPLLSQLPLTSHAEQQMGYNHDRAGRISSGM
NLPNFPFITSTQSSSEFIQPGSAFGTGAAASLAQQSLAGLQSVFLPQVPPEHSALASLAQ
YGSAEASPCYTPPLHSPSIQSPVRGRTVYNSELPNAMASRSPLTPQTSCPARLVWTPKEM
TESSVDLFTQEIKTISGSQSSIHQERPLAMSGSLEGVAESSIPFSSPMAVSKPYSPILGP
VAVPPFSRTHSGPEPQNQSVGFHSSLTRSPAKMLETEQKQSKLPSNL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattccagtcttccatgcgcaaacggctgtatagcttgccgcaaaacattggg
caaaaatccttcgtgatggacgagggagacaacggcgacaaggacaccaagaggaaaagt
attcgactaaaacatttgtcctctccgtctcctgcaaggagcattgaggaggccaggagc
gaagacttgggaagggacgttattgtgaagaccaacttgaacggggactgtcgcttattt
aggggcagcatctcttccatcaccgggcggcatcctcccgggtcagatccagcggagcag
cggcgcctcatccccgaggctgatgtcagcgagagttaccccgatgagcacagccccggg
gcccagcagtgggaatcggctggtctgactggcccagctgagcaagaatctatgtttgac
cagtcaagttttatcaagttggagggcaccgagcaaatcatttctgaggacgaccggctg
taccaagccggcttcatgcaccggcagtttggggcgatgctccaaccgggagtcaacaag
ttctctctacggatgttggggagtgagagggccgtggagcatgagagggaacgagtaaag
tctgctggcttctggataatccacccgtacagtgattttaggttctactgggatctaacc
atgctgctgctgatggtgggaaacctcatcatcatccctgtgggcatcaccttcttcaag
gacgagcacacgccgccctggattgtcttcaacgtggtctctgacaccttcttcctcatg
gaccttgtcctcaattttcgcacaggcattgtcaaagaggacaacacggagatcatccta
gacccgcatcagattaaggtcaagtacctgaagagctggttcgtggtagatttcatctcc
tccatacctgtggactacatctttctcatcgtggagacacgcatcgactcagacttttac
aagacagcgcgagccctgaggatcgtccggttcaccaagatcctcagtctgctgcggctg
cttcgcctttccagactcattcgctacatccaccagtgggaagaggttttccatatgacc
tatgacctggccagcgccatggtgcgcatcatgaacctgattggtatgatgctgctgctg
tgtcattgggatggctgtctgcagttcctggttcccatgctgcaggacttcccttctgac
tgctgggtcactagaaacaagatggtgaatgacacttggggtcagcaatattcctacgcc
ctgttcaaggccatgagtcacatgctgtgcattgggtacggcctatacccccctatcggc
atggctgacgtgtggctcaccatcctcagcatgattgtgggtgctacctgcttcgccatg
tttgtggggcatgcgactgcactcattcagtctctggactcctccaggaggcagtaccag
gaaaagtataagcaggtggagcagtacatgtccttccacaagcttcctgccgacatgcgc
cagaggatccacgaatactatgaacaccgctatcagggcaagatgtttgacgaggaaaac
attttggaggagctgaatgagccactgcgagaggagattatcaactttaactgtcgcaaa
ctggtggcctccatgcctctgtttgccaacgctgatccgaattttgtcacctccatgctg
accaaactgcgctttgaggtctttcagccgagcgactacattatcagagagggaaccatt
ggcaagaagatgtacttcatccagcatggcgtcgtcagtgtcatcacccagaagaacagc
caagacaccaagctgtctgatggctcttattttggagagatctgcctgctaacccgaggc
aggaggacagccagcgtgcgagcagataactactgtcggctgtactctctgtcagtggac
aacttcaacgaggtgctggaggagtatcccatgatgaggagggcctttgagactgtggct
ctcgaccgcctggaccgcattgggaagaggaactctgttcttcagaataaagtgcagcat
caccaaagttctggcatactaaactttcaagagagcgagatcatccaaagaatagtgcaa
catgaccgtgacatggcccattgcacgcagctgatccagactagcccaaaaagcctacac
cttcccccagcgcccccatcacctaccccggtcatctgggccccgctggtacaggccccg
ctccaggctgctgctgccaccaccccgctggctcttgccttagcccaccactccaagctg
ccttccatccttttccaccatcctctggcagcaggccccctgaaggaccccatcagccat
ccaaagagagtccatgttggagcaaatgcatccagtagctgtggttcaggacccagttct
cctgccaactccagccatttcagatctgggattgagactcctacattaacatccctcagg
gcaccgcatctcgccactgggcctgcgtcagccacactgacgtctcagcctgtcttcacc
agcaacctgcagccgctggcccctctgccctcacaccagctctcgcaccatcctccccac
tccggtatcgcctcagtcttccccatcaaccagtccactgtctcctacacctgctctgct
cagctccaccctcagccattccatggtgctatgaccaccccaccacacccgataggttta
cttcagcagggggcgccagtgaggctaacgggaagattccctgcgccctctgcctccacc
ataaaccctctcatctccagctcagttggccccttactaagccagctgccgctgacctct
cacgctgagcaacagatggggtacaatcatgacagagcaggcagaatatctagtggtatg
aacctcccaaattttcccttcatcaccagcactcagtcctccagtgaatttattcaacca
gggtctgcatttggaactggggccgcagcatccctggctcagcaaagccttgcaggtctc
caatctgttttccttccccaggttccccccgagcactctgcccttgcttccctggcccag
tatggctccgctgaagcctcgccctgctacacgcctccactccacagtcccagcatacag
agccctgtgaggggaaggacagtttacaacagtgagctccccaatgctatggcctctcgc
agccctctaacccctcagacctcatgcccagccaggttggtgtggacacccaaagagatg
actgagtcctcggtggatctctttacccaggaaataaagactatctcaggctctcaaagc
tccatacaccaggaacggcctttggccatgagcggctctttagagggggtagcagagtca
tccattcctttctcctcccccatggctgtcagtaaaccttacagcccgatcctgggtcca
gttgcagttcctccttttagtcggacacattctgggcctgaacctcagaaccaatctgtt
ggttttcactcttccctcactagatcccctgctaagatgttagagaccgaacaaaaacag
tccaaacttccatccaacttgtga
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