Etheostoma spectabile (orangethroat darter): 116694301
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Entry
116694301 CDS
T08457
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116694301
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
116694301
NCBI-ProteinID:
XP_032379846
LinkDB
All DBs
Position
8:21279035..21344391
Genome browser
AA seq
647 aa
AA seq
DB search
MLNKMTSQQQQMMRGPRWNRALSDPLFVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGAF
NGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIQPGSFK
GLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHH
NPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTQHKGRYIGELDQNYFHCYAPVIVEPP
TDLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQDT
GTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTAVQLKVGPT
PSAGTWESVSPTSTTTTTARTVLSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPPL
EHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctctcagcagcagcagatgatgcgaggtcctaggtggaaccgg
gccttgtccgaccctttgtttgtggtgcttctggccctgcaactgctggtggtggcaggg
ctggtacgtgcacagacatgcccctctgtctgctcctgtagtaaccagttcagcaaagtc
atctgcacccgacgaggtttgcgggaagtccctgatggcatctctaccaacacacgctac
ctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcacctaaga
catctggagattctgcagctaagcaaaaatcacatacgcaaaattgagctgggggcattc
aatgggctggccagcctcaataccttggagctttttgacaaccgcctcactactatccca
aacggggcatttgagtacctgtccaaactaaaggagctttggctgaggaataaccccatc
gagagcattccctcctatgctttcaacagagttccctcgttaaggcgtttggatcttggg
gagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatctgcgc
tacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtgaag
ctggatgagctggagatgtcgggaaaccagcttaccgtcatccaacctggctcttttaaa
gggctcatccatttgcagaagttatggatgatgcatgcccagatccagaccatagaaagg
aactcttttgatgacctgcagtcactagtggagctcaatctagcccataacaaccttacc
ctcttgccccatgatctctttactcctttacatcacctggagagggtgcacttgcaccac
aacccgtggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatggtg
ccagcaaacaccagctgctgtgcccgctgcagctcaccaacccagcataagggacgatac
attggcgagttggaccagaactactttcactgttatgctcctgttattgtggagcctccc
acagaccttaatgtgacagagggaagcgctgcagagttgaaatgtagagccagttctttg
acctctgtaagctggattacacccaatggttccatcatgacacatggtgcttacaagatc
agaatctccgtgctgaatgatggcactctgaacttcaccaatgttaccatgcaagacaca
ggcacgtacacatgtatggtcagtaattctgcgggtaacacaacagcatctgccacactc
aatgtgtcctctacagagaacagcagcttcagctacttcaccacagtgacagtggagacc
atagaaacaccacataatgaaggcttcaccactgctgtgcagctgaaggtggggcccaca
ccctctgctggtacatgggagtctgtttcacccacctctacaactaccactacagcccgg
accgtgctctccacccgcgctacagagaagacttacacaatccccgtcacagagctgggt
ggggagggctcgctgaatggcttggatgaggtaatgaagaccaccaagatcatcattggc
tgctttgttgcgatcacactcatggcagcagtcatgctaatcatcttctacaagatgcgc
aaacagcaccaccagcagaaccaccacgcacccacacgcaccattgagatcatcaatgtg
gacgaggactgtgtaacaggaggcccgggcatggagggccatctgaccctgcctcctcta
gagcacgagcacctcaaccactacaacacctataagactgcttacaaccatgcctccacc
atcaactccatacacagctcagcgcacgaacctttgttaatccgcgccagctcgaaagac
aatgtacaagagacccaaatctaa
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