Etheostoma spectabile (orangethroat darter): 116694344
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Entry
116694344 CDS
T08457
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116694344 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
116694344 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116694344 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116694344 (gtf2h1)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116694344 (gtf2h1)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116694344 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
116694344
NCBI-ProteinID:
XP_032379942
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All DBs
Position
8:6442809..6449964
Genome browser
AA seq
550 aa
AA seq
DB search
MSSLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFSNESSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDINNADPTISNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKEKYSENVPHNLTEKDFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVVQGVKNPLVDLLSLEDKTLDEGYGFCKTFPSTSNSNRTVKES
SNSAIIKRFNHHSAMVLAAGSRKGETPADHTSETSSTDGNSRDSDFFQPPVKKVKLQEVI
EYEDLQRENRPKTVALNLKKSDRYAHGPVPLQSQHYTTSQDIINSVNYIRHEMQNYKPNL
TQVLSSTTASSAIAALSPGGVLMQAATQQAINQMVPSEVQGELKHLYSAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQVTKLCPFQEKIQRQYLSTNLTGHLEEMLQTAYRKFHI
WQTRRMLRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactatcagaggaggtgctgctggtggtgaaaaaggttcgccagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtccagagggcaaagaccgc
ttcacagtcagccacttatatgcagatattcgctgtcagaagatcagcccagatggtaaa
gccaaaattcaactccagctggtgcttcacactggcgagagtaccacgttccacttttcc
aatgagagcagtgcactcaaagacagagatgctgccaaggagctactgcagcagctgctg
cccaagttcaagaagaaagctaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatccagtgctttttcagttgtataaggatcttgtggtgagccaggtgatcagtgcagat
gaattctgggccaaccggttaggagacataaataacgcagaccccactatatccaacaat
aaacaagaagttggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaatggcttgcgatataatctgacagctgacattattgaatccatcttcagaacatac
cctgcagtgaaggagaagtatagtgaaaatgtgcctcataacctgacggagaaggacttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatatcttctcagagtgtgccaagcaggatgaaaaggggttaaagtctatggtggttcaa
ggagtgaagaatcctttggtcgacctcctgtcattagaggataaaacattagacgagggt
tatggattttgcaaaacatttccatcaacttccaattcaaacaggacagtgaaagagagc
agcaactctgccattataaagcggttcaaccatcacagtgccatggtgctggcagcaggc
tcacgcaaaggggaaactccagctgaccacactagtgaaacgagcagtacagatggaaac
tcaagggattctgacttcttccagcctcctgtaaagaaggttaaattacaagaagtcata
gaatatgaagatctgcaaagggaaaacagaccaaaaacagtcgcattaaacctcaagaag
tctgacaggtatgcccatggtcctgttccacttcagtcccaacactatacgacaagtcag
gatatcatcaactctgtcaactacatccggcatgagatgcaaaattacaaacccaacctc
actcaggtgttgtccagcacaacagccagttctgccattgcagcactttctccaggtggc
gtcctcatgcaggcggcaacacagcaagccataaatcaaatggtacctagtgaggttcaa
ggagagttgaagcatctttattcagctgctggagagttgttgagacacttctggtcctgt
tttcctgtaaacacaccatttttagaggaaaaggtaatgaaaatgaagtcaaacctcgag
agatttcaggtgaccaagctttgtccttttcaggagaagattcagcgtcagtacttaagt
acaaacctcacagggcatttggaggaaatgttgcagacagcctatcgcaagttccacatc
tggcaaacccgccgcatgttgaggaaaacctga
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