Etheostoma spectabile (orangethroat darter): 116694429
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Entry
116694429 CDS
T08457
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04115
p53 signaling pathway
esp04120
Ubiquitin mediated proteolysis
esp04137
Mitophagy - animal
esp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116694429
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116694429
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116694429
09143 Cell growth and death
04115 p53 signaling pathway
116694429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116694429
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116694429
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116694429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
116694429
NCBI-ProteinID:
XP_032380052
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All DBs
Position
8:23085854..23131854
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AA seq
341 aa
AA seq
DB search
MSLVQVKPKPASVALQAPPWNSLFRLFSCVATRSMHRTKEVPTFQEKTKALFGNLMDEEM
SRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLV
CSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTEHEELC
EFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMM
QSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPR
SIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtccaagtgaaaccaaagccggctagcgtagcactgcaagctccgccctgg
aattccttgttccgactcttctcgtgtgtagccacaaggagcatgcacaggaccaaagag
gtcccaacatttcaagagaagacgaaagccttatttggaaatcttatggacgaagaaatg
agtcgtcagactgccaccgcgctgcccacaggaacctccaagtgccccccctcccagcga
gtgcccaccctgtcaggcaccactgcctccaacagcgacctggccagcctgtttgagtgc
cctgtctgtttcgactatgtcctaccccccatcctgcagtgccagtctggacacctggta
tgctccaactgccggcccaagctcacctgctgccccacctgccgagggcccctgggctcc
atcaggaacctggccatggagaaggtggccaactcggtcctcttcccctgcaagtacgcg
tcatcgggctgcgaagtcacgctgcctcacaccgacaagacggagcacgaagagctgtgc
gagttccggccgtactcctgcccctgccccggcgcctcctgcaagtggcagggctccctg
gacgctgtcatgcctcatctgatgcaccagcacaagtccatcaccacactgcagggggag
gacattgtgttcctagccacggacatcaacctgccgggcgccgtggactgggtgatgatg
cagtcgtgtttcggcttccacttcatgctggtgctggagaagcaggagaagtacgacggc
caccagcagttcttcgccatcgtgcagcttatcggcacccgcaagcaggcggagaacttc
gcctaccggctggagctcaatgggcaccggcgccgcctgacctgggaggccacgccgcgc
tccatccacgagggcatcgccacggccatcatgaacagcgactgcctggtgttcgacacg
tccatcgcacagctgttcgctgagaacggcaacctgggcatcaacgtcaccatctccatg
tgctag
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